RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 MCM10Q7L590 875 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 MNS1Q8NEH6 495 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
TVP23C-208ENST00000581273 JDP2Q8WYK2 163 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 EXOC4Q96A65 974 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 FAM122AQ96E09 287 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 NAT10Q9H0A0 1025 aaKnown RBP8.69□□□□□ -1.02
TVP23C-208ENST00000581273 L2HGDHQ9H9P8 463 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 NUP98P52948 1817 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 C2orf72A6NCS6 295 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 G3V3G9 751 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 POTEB2H3BUK9 544 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 CAPN2P17655 700 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 BRD2P25440 801 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 ALDH1B1P30837 517 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 EPS15P42566 896 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 PDE1AP54750 535 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 EIF6P56537 245 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 HLFQ16534 295 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 GIMAP6Q6P9H5 292 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 FBXO38Q6PIJ6 1188 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 FBXO46Q6PJ61 603 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 CLEC4GQ6UXB4 293 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 GPC2Q8N158 579 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 UBXN4Q92575 508 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 JARID2Q92833 1246 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 NCAPGQ9BPX3 1015 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 TACO1Q9BSH4 297 aaKnown RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 ANO2Q9NQ90 1003 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 RSPH14Q9UHP6 348 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF215Q9UL58 517 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 CNPY2Q9Y2B0 182 aa8.68□□□□□ -1.02
TVP23C-208ENST00000581273 COL3A1P02461 1466 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-208ENST00000581273 GOLGA6L9A6NEM1 432 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 FZD9O00144 591 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 FIBPO43427 364 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 TUBBP07437 444 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 HSPA4P34932 840 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CCT4P50991 539 aaKnown RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 DCTN1Q14203 1278 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 ZRSR1Q15695 479 aaKnown RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CCDC158Q5M9N0 1113 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CEP85Q6P2H3 762 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CCDC91Q7Z6B0 441 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 LRRC8AQ8IWT6 810 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 MSL3Q8N5Y2 521 aaKnown RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 FBXO18Q8NFZ0 1043 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF296Q8WUU4 475 aaPredicted RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 RUFY2Q8WXA3 655 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
TVP23C-208ENST00000581273 SNX27Q96L92 541 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 ACBD3Q9H3P7 528 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CLSTN2Q9H4D0 955 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 MIS18AQ9NYP9 233 aa8.67□□□□□ -1.02
TVP23C-208ENST00000581273 CACNA1AO00555 2505 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 PHLPP2Q6ZVD8 1323 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 BECN2A8MW95 431 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 KIF1CO43896 1103 aaKnown RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 SKILP12757 684 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 SYT1P21579 422 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 GPTP24298 496 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 GUCY2CP25092 1073 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF165P49910 485 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 HUNKP57058 714 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 SNW1Q13573 536 aaKnown RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 ELF2Q15723 593 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 STX1AQ16623 288 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 ZSCAN26Q16670 478 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 CCAR2Q8N163 923 aaKnown RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 PPM1EQ8WY54 764 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 CSRNP1Q96S65 589 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 TM6SF1Q9BZW5 370 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 CBX8Q9HC52 389 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 STAP2Q9UGK3 403 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 LRRFIP2Q9Y608 721 aaKnown RBP8.66□□□□□ -1.02
TVP23C-208ENST00000581273 MRVI1Q9Y6F6 885 aa8.66□□□□□ -1.02
TVP23C-208ENST00000581273 POLR2AP24928 1970 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms