RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 INPP5BP32019 993 aa20.29■□□□□ 0.84
SREBF1-219ENST00000580540 IFNL1Q8IU54 200 aa20.29■□□□□ 0.84
SREBF1-219ENST00000580540 TEX11Q8IYF3 940 aa20.29■□□□□ 0.84
SREBF1-219ENST00000580540 AATFQ9NY61 560 aaKnown RBP eCLIP20.29■□□□□ 0.84
SREBF1-219ENST00000580540 SNCAIPQ9Y6H5 919 aa20.29■□□□□ 0.84
SREBF1-219ENST00000580540 DDTLA6NHG4 134 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-219ENST00000580540 BAG3O95817 575 aa20.28■□□□□ 0.84
SREBF1-219ENST00000580540 SH3BP5LQ7L8J4 393 aa20.28■□□□□ 0.84
SREBF1-219ENST00000580540 SH3RF3Q8TEJ3 882 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-219ENST00000580540 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
SREBF1-219ENST00000580540 IGF2BP3O00425 579 aaKnown RBP eCLIP20.27■□□□□ 0.84
SREBF1-219ENST00000580540 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
SREBF1-219ENST00000580540 CYP7A1P22680 504 aa20.27■□□□□ 0.84
SREBF1-219ENST00000580540 DGKZQ13574 1117 aa20.27■□□□□ 0.84
SREBF1-219ENST00000580540 OTUD7BQ6GQQ9 843 aa20.27■□□□□ 0.84
SREBF1-219ENST00000580540 ERO1BQ86YB8 467 aa20.27■□□□□ 0.84
SREBF1-219ENST00000580540 RFX7Q2KHR2 1363 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 SPDYE5A6NIY4 337 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-219ENST00000580540 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-219ENST00000580540 GTF2A2P52657 109 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 ADGRA1Q86SQ6 560 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 MAGEB6Q8N7X4 407 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 DNAJC2Q99543 621 aaKnown RBP20.26■□□□□ 0.83
SREBF1-219ENST00000580540 LRRCC1Q9C099 1032 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 R3HDMLQ9H3Y0 253 aa20.26■□□□□ 0.83
SREBF1-219ENST00000580540 MYO5AQ9Y4I1 1855 aaKnown RBP20.25■□□□□ 0.83
SREBF1-219ENST00000580540 CCL15-CCL14A0A0B4J2E2 113 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 SLURP2P0DP57 97 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 PLCG2P16885 1265 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 MAP3K12Q12852 859 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 CCL15Q16663 113 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 ZNF112Q9UJU3 913 aa20.25■□□□□ 0.83
SREBF1-219ENST00000580540 GPR25O00155 361 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 MIGA1Q8NAN2 632 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 ZNF296Q8WUU4 475 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-219ENST00000580540 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 CRBNQ96SW2 442 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 PTPN18Q99952 460 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 MCOLN1Q9GZU1 580 aa20.24■□□□□ 0.83
SREBF1-219ENST00000580540 OSBPL5Q9H0X9 879 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-219ENST00000580540 GOLIM4O00461 696 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 IRF6O14896 467 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
SREBF1-219ENST00000580540 PPP4CP60510 307 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 DYNLL1P63167 89 aaKnown RBP20.23■□□□□ 0.83
SREBF1-219ENST00000580540 PPIL2Q13356 520 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 TTF1Q15361 905 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-219ENST00000580540 MAPKAPK5Q8IW41 473 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 BRI3BPQ8WY22 251 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 ABHD8Q96I13 439 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 BOLA2Q9H3K6 86 aa20.23■□□□□ 0.83
SREBF1-219ENST00000580540 TESPA1A2RU30 521 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-219ENST00000580540 FAM196BA6NMK8 535 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 IGSF3O75054 1194 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 PPATQ06203 517 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 SNAPC2Q13487 334 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
SREBF1-219ENST00000580540 PICK1Q9NRD5 415 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
SREBF1-219ENST00000580540 MAST2Q6P0Q8 1798 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 DOCK2Q92608 1830 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 FKTNO75072 461 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 CETPP11597 493 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.21■□□□□ 0.83
SREBF1-219ENST00000580540 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 ATRNL1Q5VV63 1379 aa20.21■□□□□ 0.83
SREBF1-219ENST00000580540 CRHR2Q13324 411 aa20.2■□□□□ 0.82
SREBF1-219ENST00000580540 NOL9Q5SY16 702 aaKnown RBP20.2■□□□□ 0.82
SREBF1-219ENST00000580540 SCYL3Q8IZE3 742 aa20.2■□□□□ 0.82
SREBF1-219ENST00000580540 EDC3Q96F86 508 aaKnown RBP20.2■□□□□ 0.82
SREBF1-219ENST00000580540 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
SREBF1-219ENST00000580540 SAP30BPQ9UHR5 308 aaKnown RBP20.2■□□□□ 0.82
SREBF1-219ENST00000580540 USP5P45974 858 aa20.19■□□□□ 0.82
SREBF1-219ENST00000580540 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
SREBF1-219ENST00000580540 TAF1CQ15572 869 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-219ENST00000580540 SLC9C2Q5TAH2 1124 aa20.19■□□□□ 0.82
SREBF1-219ENST00000580540 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
SREBF1-219ENST00000580540 FAM43AQ8N2R8 423 aa20.19■□□□□ 0.82
SREBF1-219ENST00000580540 ZHX2Q9Y6X8 837 aa20.19■□□□□ 0.82
SREBF1-219ENST00000580540 CCDC85CA6NKD9 419 aa20.18■□□□□ 0.82
SREBF1-219ENST00000580540 CTNND1O60716 968 aaKnown RBP20.18■□□□□ 0.82
SREBF1-219ENST00000580540 ATP5JP18859 108 aa20.18■□□□□ 0.82
SREBF1-219ENST00000580540 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
SREBF1-219ENST00000580540 PAG1Q9NWQ8 432 aa20.18■□□□□ 0.82
SREBF1-219ENST00000580540 FLT1P17948 1338 aa20.18■□□□□ 0.82
SREBF1-219ENST00000580540 BTBD19C9JJ37 291 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 TBC1D12O60347 775 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 PDE6AP16499 860 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 NOM1Q5C9Z4 860 aaKnown RBP20.17■□□□□ 0.82
SREBF1-219ENST00000580540 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 DHX36Q9H2U1 1008 aaKnown RBP20.17■□□□□ 0.82
SREBF1-219ENST00000580540 ZFYVE28Q9HCC9 887 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
SREBF1-219ENST00000580540 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
SREBF1-219ENST00000580540 PTPRAP18433 802 aa20.16■□□□□ 0.82
SREBF1-219ENST00000580540 CERS3Q8IU89 383 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms