RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 IFNAR1P17181 557 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PTGS1P23219 599 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CMA1P23946 247 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NDUFA8P51970 172 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PPARAQ07869 468 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 GNL2Q13823 731 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 WTAPQ15007 396 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RTN1Q16799 776 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FAM98CQ17RN3 349 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CAVIN4Q5BKX8 364 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RRP12Q5JTH9 1297 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 AXDND1Q5T1B0 1012 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DRC7Q8IY82 874 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CCDC144CPQ8IYA2 1237 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TMTC2Q8N394 836 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 JMYQ8N9B5 988 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PHKBQ93100 1093 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 AIFM3Q96NN9 605 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MYL10Q9BUA6 226 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SLC26A6Q9BXS9 759 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 INCENPQ9NQS7 918 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TOMM22Q9NS69 142 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RAI14Q9P0K7 980 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PDS5AQ29RF7 1337 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DUOX1Q9NRD9 1551 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BECN2A8MW95 431 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TOM1O60784 492 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 U2AF2P26368 475 aaKnown RBP eCLIP10.82□□□□□ -0.683e-14■■■□□ 18
CDK5RAP3-208ENST00000578525 GYG1P46976 350 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PTPAQ15257 358 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TBC1D9BQ66K14 1250 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 KIAA1524Q8TCG1 905 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MRFAP1L1Q96HT8 127 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 TIGD1Q96MW7 591 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SDF4Q9BRK5 362 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NAT10Q9H0A0 1025 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NARFQ9UHQ1 456 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PYCARDQ9ULZ3 195 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MINPP1Q9UNW1 487 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DLEC1Q9Y238 1755 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 UQCRHLA0A096LP55 91 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FAM237AA0A1B0GTK4 181 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CUTAO60888 179 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 UQCRHP07919 91 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SLC3A2P08195 630 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PFKFB1P16118 471 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 GTF2E1P29083 439 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 NLRP12P59046 1061 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SAFBQ15424 915 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BICDL1Q6ZP65 573 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CCDC186Q7Z3E2 898 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FBXO33Q7Z6M2 555 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ADGRA1Q86SQ6 560 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZNF654Q8IZM8 581 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ESR2Q92731 530 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MAP3K14Q99558 947 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BPIFA3Q9BQP9 254 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RIOK1Q9BRS2 568 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BRIP1Q9BX63 1249 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ANKRD2Q9GZV1 360 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 KIAA1468Q9P260 1216 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ABCF2Q9UG63 623 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 IQSEC3Q9UPP2 1182 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 BTAF1O14981 1849 aa10.81□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZBTB22O15209 634 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 WDHD1O75717 1129 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZNF202O95125 648 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 DEXIO95424 95 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PCP11498 1178 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 RBM6P78332 1123 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PIP4K2BP78356 416 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 SEC23AQ15436 765 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZRSR1Q15695 479 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 C17orf53Q8N3J3 647 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 AOPEPQ8N6M6 819 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 FAM84BQ96KN1 310 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 PRIMPOLQ96LW4 560 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 UBAC1Q9BSL1 405 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 CLIP2Q9UDT6 1046 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 LAMB1P07942 1786 aa10.8□□□□□ -0.68
CDK5RAP3-208ENST00000578525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-208ENST00000578525 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms