RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 AATFQ9NY61 560 aaKnown RBP eCLIP3.33□□□□□ -1.882e-8■■■■□ 22.6
SMCHD1-203ENST00000577880 PALLDQ8WX93 1383 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNF804BA4D1E1 1349 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SPATA31A3Q5VYP0 1347 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SMTNL1A8MU46 457 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GTPBP6O43824 516 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MBD4O95243 580 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GNAT1P11488 350 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 BIRC3Q13489 604 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SPA17Q15506 151 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ABCB5Q2M3G0 1257 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 CWF19L2Q2TBE0 894 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MCMDC2Q4G0Z9 681 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 UTP14CQ5TAP6 766 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MCTP2Q6DN12 878 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 FASTKD5Q7L8L6 764 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 NOX5Q96PH1 765 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 NEK1Q96PY6 1258 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 RIOK1Q9BRS2 568 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNF341Q9BYN7 854 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ANO3Q9BYT9 981 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 KLF18A0A0U1RQI7 1052 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 TESPA1A2RU30 521 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 TYW5A2RUC4 315 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ARHGEF35A5YM69 484 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 PATL2C9JE40 543 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ABL1P00519 1130 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 KCNQ4P56696 695 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 CCT2P78371 535 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ICA1Q05084 483 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 PLVAPQ9BX97 442 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MMRN2Q9H8L6 949 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 EXOC1Q9NV70 894 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 RBM28Q9NW13 759 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 CLIP2Q9UDT6 1046 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNF215Q9UL58 517 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ABCA5Q8WWZ7 1642 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 FANCIQ9NVI1 1328 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GSTTP1A0A1W2PQM5 241 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 M0R2C6 588 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SEMA3EO15041 775 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 STX10O60499 249 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ACTN1P12814 892 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ATF7P17544 494 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GCKRQ14397 625 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ENOX2Q16206 610 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 WDR44Q5JSH3 913 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 KLHL10Q6JEL2 608 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 KANK3Q6NY19 840 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MICALL1Q8N3F8 863 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GSDMBQ8TAX9 411 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 HAUS7Q99871 368 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 HINFPQ9BQA5 517 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SLITRK6Q9H5Y7 841 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ASAP1Q9ULH1 1129 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 NKTRP30414 1462 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 OVOS2A0A0G2JMS6 1433 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 OVOS2A0A0J9YW53 1432 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 OVOS2Q6IE36 1432 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 TRIM75PA6NK02 468 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SMARCA5O60264 1052 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 CELF2O95319 508 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GAS8O95995 478 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 ALDH1A1P00352 501 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 PDE4AP27815 886 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 RBM25P49756 843 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 UBE4AQ14139 1066 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 SLC15A2Q16348 729 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MAP3K11Q16584 847 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 TDRD12Q587J7 1177 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 HAUS3Q68CZ6 603 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 RUFY4Q6ZNE9 571 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 LZTS2Q9BRK4 669 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 GTPBP4Q9BZE4 634 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 COA1Q9GZY4 146 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 FBXO40Q9UH90 709 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.32□□□□□ -1.887e-7■■□□□ 12
SMCHD1-203ENST00000577880 MRVI1Q9Y6F6 885 aa3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 AHDC1Q5TGY3 1603 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-203ENST00000577880 MAP3K15Q6ZN16 1313 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 NUP153P49790 1475 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 PTPN23Q9H3S7 1636 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 A0A1B0GUL7 405 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 NDC80O14777 642 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 P4HA1P13674 534 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 LMNB1P20700 586 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 XPAP23025 273 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 KIF4BQ2VIQ3 1234 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 Q3C1V9 767 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 USH1GQ495M9 461 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 HSP90B2PQ58FF3 399 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ZNF569Q5MCW4 686 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 AKNAD1Q5T1N1 836 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 CLEC4GQ6UXB4 293 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 NUDT18Q6ZVK8 323 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 KIAA1328Q86T90 577 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 ELMOD1Q8N336 334 aa3.31□□□□□ -1.88
SMCHD1-203ENST00000577880 SPAG5Q96R06 1193 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms