RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 SNAPC2Q13487 334 aa20.19■□□□□ 0.82
TVP23B-206ENST00000574226 TBC1D9Q6ZT07 1266 aa20.19■□□□□ 0.82
TVP23B-206ENST00000574226 MIGA2Q7L4E1 593 aa20.19■□□□□ 0.82
TVP23B-206ENST00000574226 ZKSCAN4Q969J2 545 aaPredicted RBP20.19■□□□□ 0.82
TVP23B-206ENST00000574226 CCL15-CCL14A0A0B4J2E2 113 aa20.18■□□□□ 0.82
TVP23B-206ENST00000574226 MAP3K10Q02779 954 aa20.18■□□□□ 0.82
TVP23B-206ENST00000574226 CCL15Q16663 113 aa20.18■□□□□ 0.82
TVP23B-206ENST00000574226 NOL9Q5SY16 702 aaKnown RBP20.18■□□□□ 0.82
TVP23B-206ENST00000574226 ZSCAN29Q8IWY8 852 aaPredicted RBP20.18■□□□□ 0.82
TVP23B-206ENST00000574226 EAF2Q96CJ1 260 aaPredicted RBP20.18■□□□□ 0.82
TVP23B-206ENST00000574226 DBNLQ9UJU6 430 aaKnown RBP20.18■□□□□ 0.82
TVP23B-206ENST00000574226 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
TVP23B-206ENST00000574226 COL2A1P02458 1487 aaPredicted RBP20.18■□□□□ 0.82
TVP23B-206ENST00000574226 MAST2Q6P0Q8 1798 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 RHBDL3P58872 404 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 NAA16Q6N069 864 aaPredicted RBP20.17■□□□□ 0.82
TVP23B-206ENST00000574226 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 ZNF384Q8TF68 577 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 ATRNL1Q5VV63 1379 aa20.17■□□□□ 0.82
TVP23B-206ENST00000574226 RAB11FIP3O75154 756 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
TVP23B-206ENST00000574226 RHPN1Q8TCX5 695 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 CNKSR2Q8WXI2 1034 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 BRI3BPQ8WY22 251 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 KIF1BPQ96EK5 621 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 PTPN18Q99952 460 aa20.16■□□□□ 0.82
TVP23B-206ENST00000574226 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
TVP23B-206ENST00000574226 IRF6O14896 467 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 TBC1D12O60347 775 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
TVP23B-206ENST00000574226 INPP5BP32019 993 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 PPP4CP60510 307 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 CRHR2Q13324 411 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 ARHGEF6Q15052 776 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 AACSQ86V21 672 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 ERO1AQ96HE7 468 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 ZFYVE28Q9HCC9 887 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 SNRKQ9NRH2 765 aa20.15■□□□□ 0.82
TVP23B-206ENST00000574226 PICALMQ13492 652 aa20.14■□□□□ 0.81
TVP23B-206ENST00000574226 R3HDMLQ9H3Y0 253 aa20.14■□□□□ 0.81
TVP23B-206ENST00000574226 DDX4Q9NQI0 724 aaKnown RBP20.14■□□□□ 0.81
TVP23B-206ENST00000574226 PICK1Q9NRD5 415 aa20.14■□□□□ 0.81
TVP23B-206ENST00000574226 KCNH4Q9UQ05 1017 aa20.14■□□□□ 0.81
TVP23B-206ENST00000574226 CXCL11O14625 94 aa20.13■□□□□ 0.81
TVP23B-206ENST00000574226 CTNND1O60716 968 aaKnown RBP20.13■□□□□ 0.81
TVP23B-206ENST00000574226 ZAP70P43403 619 aa20.13■□□□□ 0.81
TVP23B-206ENST00000574226 TAF1CQ15572 869 aaPredicted RBP20.13■□□□□ 0.81
TVP23B-206ENST00000574226 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
TVP23B-206ENST00000574226 TEX11Q8IYF3 940 aa20.13■□□□□ 0.81
TVP23B-206ENST00000574226 DHX36Q9H2U1 1008 aaKnown RBP20.13■□□□□ 0.81
TVP23B-206ENST00000574226 DDTLA6NHG4 134 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-206ENST00000574226 PHF20L1A8MW92 1017 aa20.12■□□□□ 0.81
TVP23B-206ENST00000574226 SP3Q02447 781 aa20.12■□□□□ 0.81
TVP23B-206ENST00000574226 TTF1Q15361 905 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-206ENST00000574226 SH3BP5LQ7L8J4 393 aa20.12■□□□□ 0.81
TVP23B-206ENST00000574226 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
TVP23B-206ENST00000574226 OSBPL5Q9H0X9 879 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-206ENST00000574226 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
TVP23B-206ENST00000574226 MAP3K12Q12852 859 aa20.11■□□□□ 0.81
TVP23B-206ENST00000574226 SIRT2Q8IXJ6 389 aa20.11■□□□□ 0.81
TVP23B-206ENST00000574226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.11■□□□□ 0.81
TVP23B-206ENST00000574226 HERC5Q9UII4 1024 aaKnown RBP20.11■□□□□ 0.81
TVP23B-206ENST00000574226 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
TVP23B-206ENST00000574226 RGS19P49795 217 aa20.1■□□□□ 0.81
TVP23B-206ENST00000574226 ANKRD23Q86SG2 305 aa20.1■□□□□ 0.81
TVP23B-206ENST00000574226 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
TVP23B-206ENST00000574226 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
TVP23B-206ENST00000574226 AATFQ9NY61 560 aaKnown RBP eCLIP20.1■□□□□ 0.81
TVP23B-206ENST00000574226 MYO5AQ9Y4I1 1855 aaKnown RBP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 BTBD19C9JJ37 291 aa20.09■□□□□ 0.81
TVP23B-206ENST00000574226 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 FASTKD5Q7L8L6 764 aaKnown RBP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 SH3RF3Q8TEJ3 882 aaPredicted RBP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
TVP23B-206ENST00000574226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
TVP23B-206ENST00000574226 PI4KBQ9UBF8 816 aa20.09■□□□□ 0.81
TVP23B-206ENST00000574226 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
TVP23B-206ENST00000574226 DOCK1Q14185 1865 aa20.08■□□□□ 0.81
TVP23B-206ENST00000574226 TLR2O60603 784 aa20.08■□□□□ 0.81
TVP23B-206ENST00000574226 PTPRAP18433 802 aa20.08■□□□□ 0.81
TVP23B-206ENST00000574226 ZHX2Q9Y6X8 837 aa20.08■□□□□ 0.81
TVP23B-206ENST00000574226 FOCADQ5VW36 1801 aa20.08■□□□□ 0.8
TVP23B-206ENST00000574226 CYP7A1P22680 504 aa20.07■□□□□ 0.8
TVP23B-206ENST00000574226 OTOP1Q7RTM1 612 aa20.07■□□□□ 0.8
TVP23B-206ENST00000574226 EFCC1Q9HA90 598 aa20.07■□□□□ 0.8
TVP23B-206ENST00000574226 TRIM17Q9Y577 477 aa20.07■□□□□ 0.8
TVP23B-206ENST00000574226 KIF22Q14807 665 aa20.06■□□□□ 0.8
TVP23B-206ENST00000574226 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
TVP23B-206ENST00000574226 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
TVP23B-206ENST00000574226 CDK5RAP2Q96SN8 1893 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 APBB1O00213 710 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 GNRH1P01148 92 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 ADGRA1Q86SQ6 560 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 MAGEB6Q8N7X4 407 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 CD99L2Q8TCZ2 262 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
TVP23B-206ENST00000574226 TRIM34Q9BYJ4 488 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms