RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PI16Q6UXB8 463 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 OTOFQ9HC10 1997 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
NDE1-207ENST00000573203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
NDE1-207ENST00000573203 HMMRO75330 724 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 MCAMP43121 646 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 SPRYD7Q5W111 196 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 ERC1Q8IUD2 1116 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
NDE1-207ENST00000573203 ANKRD13AQ8IZ07 590 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 HOOK2Q96ED9 719 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
NDE1-207ENST00000573203 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
NDE1-207ENST00000573203 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 RNF186Q9NXI6 227 aa11.13□□□□□ -0.63
NDE1-207ENST00000573203 GSTO1P78417 241 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 MECOMQ03112 1051 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 TCP10Q12799 353 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 FAM151AQ8WW52 585 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 SCUBE2Q9NQ36 999 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 RAI14Q9P0K7 980 aa11.12□□□□□ -0.63
NDE1-207ENST00000573203 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
NDE1-207ENST00000573203 MROH7-TTC4A0A0A0MT08 1334 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 GAKO14976 1311 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 APBB1O00213 710 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 LDHCP07864 332 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 ZBTB48P10074 688 aaPredicted RBP11.11□□□□□ -0.63
NDE1-207ENST00000573203 BTDP43251 543 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 TM4SF4P48230 202 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
NDE1-207ENST00000573203 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
NDE1-207ENST00000573203 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
NDE1-207ENST00000573203 CSADQ9Y600 493 aa11.11□□□□□ -0.63
NDE1-207ENST00000573203 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
NDE1-207ENST00000573203 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
NDE1-207ENST00000573203 RGS3P49796 1198 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 INHBEP58166 350 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 NFIAQ12857 509 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.1□□□□□ -0.63
NDE1-207ENST00000573203 AACSQ86V21 672 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
NDE1-207ENST00000573203 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 NSUN4Q96CB9 384 aaKnown RBP11.1□□□□□ -0.63
NDE1-207ENST00000573203 OPTNQ96CV9 577 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 TLR7Q9NYK1 1049 aaKnown RBP11.1□□□□□ -0.63
NDE1-207ENST00000573203 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 LAMB1P07942 1786 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 MAST2Q6P0Q8 1798 aa11.1□□□□□ -0.63
NDE1-207ENST00000573203 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 TBC1D8O95759 1140 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 GJA5P36382 358 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 ZAP70P43403 619 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 VGLL4Q14135 290 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 MIGA2Q7L4E1 593 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
NDE1-207ENST00000573203 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
NDE1-207ENST00000573203 ZNF384Q8TF68 577 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 ZNF512BQ96KM6 892 aaPredicted RBP11.09□□□□□ -0.63
NDE1-207ENST00000573203 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
NDE1-207ENST00000573203 IDI2Q9BXS1 227 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 BCL11AQ9H165 835 aa11.09□□□□□ -0.63
NDE1-207ENST00000573203 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
NDE1-207ENST00000573203 ENTPD3O75355 529 aa11.08□□□□□ -0.64
NDE1-207ENST00000573203 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
NDE1-207ENST00000573203 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
NDE1-207ENST00000573203 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
NDE1-207ENST00000573203 PICALMQ13492 652 aa11.08□□□□□ -0.64
NDE1-207ENST00000573203 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
NDE1-207ENST00000573203 ZFPM1Q8IX07 1006 aa11.08□□□□□ -0.64
NDE1-207ENST00000573203 CLASRPQ8N2M8 674 aaKnown RBP11.08□□□□□ -0.64
NDE1-207ENST00000573203 ZKSCAN4Q969J2 545 aaPredicted RBP11.08□□□□□ -0.64
NDE1-207ENST00000573203 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
NDE1-207ENST00000573203 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms