RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 ZCCHC17Q9NP64 241 aaKnown RBP21.33■■□□□ 1.01
LITAF-211ENST00000572255 DDX4Q9NQI0 724 aaKnown RBP21.33■■□□□ 1.01
LITAF-211ENST00000572255 FPGT-TNNI3KV9GXZ4 949 aa21.33■■□□□ 1.01
LITAF-211ENST00000572255 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
LITAF-211ENST00000572255 GSTO1P78417 241 aa21.32■■□□□ 1
LITAF-211ENST00000572255 CAP1Q01518 475 aa21.32■■□□□ 1
LITAF-211ENST00000572255 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
LITAF-211ENST00000572255 ZSCAN29Q8IWY8 852 aaPredicted RBP21.32■■□□□ 1
LITAF-211ENST00000572255 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
LITAF-211ENST00000572255 NSUN4Q96CB9 384 aaKnown RBP21.32■■□□□ 1
LITAF-211ENST00000572255 LDHCP07864 332 aa21.31■■□□□ 1
LITAF-211ENST00000572255 RHBDL3P58872 404 aa21.31■■□□□ 1
LITAF-211ENST00000572255 PICALMQ13492 652 aa21.31■■□□□ 1
LITAF-211ENST00000572255 DBNDD2Q9BQY9 259 aa21.31■■□□□ 1
LITAF-211ENST00000572255 RAI14Q9P0K7 980 aa21.31■■□□□ 1
LITAF-211ENST00000572255 KCNH4Q9UQ05 1017 aa21.31■■□□□ 1
LITAF-211ENST00000572255 PTPN22Q9Y2R2 807 aa21.31■■□□□ 1
LITAF-211ENST00000572255 DDTLA6NHG4 134 aaPredicted RBP21.3■■□□□ 1
LITAF-211ENST00000572255 PHF20L1A8MW92 1017 aa21.3■■□□□ 1
LITAF-211ENST00000572255 TTC39AQ5SRH9 613 aa21.3■■□□□ 1
LITAF-211ENST00000572255 NOP58Q9Y2X3 529 aaKnown RBP21.3■■□□□ 1
LITAF-211ENST00000572255 PDE4DIPQ5VU43 2346 aa21.29■■□□□ 1
LITAF-211ENST00000572255 MAST2Q6P0Q8 1798 aa21.29■■□□□ 1
LITAF-211ENST00000572255 TLR2O60603 784 aa21.29■■□□□ 1
LITAF-211ENST00000572255 MAP3K10Q02779 954 aa21.29■■□□□ 1
LITAF-211ENST00000572255 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
LITAF-211ENST00000572255 PANK1Q8TE04 598 aa21.29■■□□□ 1
LITAF-211ENST00000572255 SNRKQ9NRH2 765 aa21.29■■□□□ 1
LITAF-211ENST00000572255 LRP2BPQ9P2M1 347 aa21.29■■□□□ 1
LITAF-211ENST00000572255 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
LITAF-211ENST00000572255 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
LITAF-211ENST00000572255 ARHGEF6Q15052 776 aa21.28■■□□□ 1
LITAF-211ENST00000572255 ANKRD23Q86SG2 305 aa21.28■■□□□ 1
LITAF-211ENST00000572255 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
LITAF-211ENST00000572255 DOCK1Q14185 1865 aa21.28■■□□□ 1
LITAF-211ENST00000572255 SLURP2P0DP57 97 aa21.27■■□□□ 1
LITAF-211ENST00000572255 MOGSQ13724 837 aa21.27■■□□□ 1
LITAF-211ENST00000572255 CEP85Q6P2H3 762 aa21.27■■□□□ 1
LITAF-211ENST00000572255 PICK1Q9NRD5 415 aa21.27■■□□□ 1
LITAF-211ENST00000572255 ZSWIM8A7E2V4 1837 aa21.27■□□□□ 0.99
LITAF-211ENST00000572255 PDHXO00330 501 aa21.26■□□□□ 0.99
LITAF-211ENST00000572255 MYO5AQ9Y4I1 1855 aaKnown RBP21.26■□□□□ 0.99
LITAF-211ENST00000572255 CENPFP49454 3210 aa21.25■□□□□ 0.99
LITAF-211ENST00000572255 CXCL11O14625 94 aa21.25■□□□□ 0.99
LITAF-211ENST00000572255 PTPRAP18433 802 aa21.25■□□□□ 0.99
LITAF-211ENST00000572255 ZNF512BQ96KM6 892 aaPredicted RBP21.25■□□□□ 0.99
LITAF-211ENST00000572255 TLR7Q9NYK1 1049 aaKnown RBP21.25■□□□□ 0.99
LITAF-211ENST00000572255 DBNLQ9UJU6 430 aaKnown RBP21.25■□□□□ 0.99
LITAF-211ENST00000572255 ZHX2Q9Y6X8 837 aa21.25■□□□□ 0.99
LITAF-211ENST00000572255 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
LITAF-211ENST00000572255 PHIPQ8WWQ0 1821 aa21.25■□□□□ 0.99
LITAF-211ENST00000572255 CTNND1O60716 968 aaKnown RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 CYP2E1P05181 493 aaPredicted RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 LACTBP83111 547 aaPredicted RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 KIF22Q14807 665 aa21.24■□□□□ 0.99
LITAF-211ENST00000572255 NAA16Q6N069 864 aaPredicted RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 TEX11Q8IYF3 940 aa21.24■□□□□ 0.99
LITAF-211ENST00000572255 ARMC5Q96C12 935 aa21.24■□□□□ 0.99
LITAF-211ENST00000572255 NOL10Q9BSC4 688 aaKnown RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
LITAF-211ENST00000572255 PTPRFP10586 1907 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 TBC1D12O60347 775 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 MS4A1P11836 297 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 ZAP70P43403 619 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 GPAT2Q6NUI2 795 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 C17orf99Q6UX52 265 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 SH3RF3Q8TEJ3 882 aaPredicted RBP21.23■□□□□ 0.99
LITAF-211ENST00000572255 EAF2Q96CJ1 260 aaPredicted RBP21.23■□□□□ 0.99
LITAF-211ENST00000572255 ARHGAP39Q9C0H5 1083 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 OSBPL5Q9H0X9 879 aaPredicted RBP21.23■□□□□ 0.99
LITAF-211ENST00000572255 CPA4Q9UI42 421 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 ADGRA2Q96PE1 1338 aa21.23■□□□□ 0.99
LITAF-211ENST00000572255 RBBP6Q7Z6E9 1792 aaKnown RBP21.23■□□□□ 0.99
LITAF-211ENST00000572255 A0A0G2JLL6 359 aaPredicted RBP21.22■□□□□ 0.99
LITAF-211ENST00000572255 FAM196BA6NMK8 535 aa21.22■□□□□ 0.99
LITAF-211ENST00000572255 PRRT2Q7Z6L0 340 aaPredicted RBP21.22■□□□□ 0.99
LITAF-211ENST00000572255 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■□□ 18
LITAF-211ENST00000572255 AATFQ9NY61 560 aaKnown RBP eCLIP21.22■□□□□ 0.99
LITAF-211ENST00000572255 EXOC6BQ9Y2D4 811 aa21.22■□□□□ 0.99
LITAF-211ENST00000572255 AFG3L2Q9Y4W6 797 aa21.22■□□□□ 0.99
LITAF-211ENST00000572255 PTCH2Q9Y6C5 1203 aa21.22■□□□□ 0.99
LITAF-211ENST00000572255 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
LITAF-211ENST00000572255 BAG3O95817 575 aa21.21■□□□□ 0.99
LITAF-211ENST00000572255 FASTKD5Q7L8L6 764 aaKnown RBP21.21■□□□□ 0.99
LITAF-211ENST00000572255 PIH1D3Q9NQM4 214 aaKnown RBP21.21■□□□□ 0.99
LITAF-211ENST00000572255 FOCADQ5VW36 1801 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 KIAA0100Q14667 2235 aaKnown RBP21.2■□□□□ 0.98
LITAF-211ENST00000572255 POTEFA5A3E0 1075 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 PLCG2P16885 1265 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 PPP4CP60510 307 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 GADL1Q6ZQY3 521 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 ADGRA1Q86SQ6 560 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 ERC1Q8IUD2 1116 aa21.2■□□□□ 0.98
LITAF-211ENST00000572255 PARK7Q99497 189 aaKnown RBP21.2■□□□□ 0.98
LITAF-211ENST00000572255 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.2■□□□□ 0.98
LITAF-211ENST00000572255 IGSF3O75054 1194 aa21.19■□□□□ 0.98
LITAF-211ENST00000572255 GNRH1P01148 92 aa21.19■□□□□ 0.98
LITAF-211ENST00000572255 SLC9C1Q4G0N8 1177 aa21.19■□□□□ 0.98
LITAF-211ENST00000572255 CCDC84Q86UT8 332 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms