RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
SCARF1-205ENST00000571272 BTBD18B2RXH4 712 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 WDR24Q96S15 920 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.05■□□□□ 0.8
SCARF1-205ENST00000571272 ARGLU1Q9NWB6 273 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-205ENST00000571272 COL18A1P39060 1754 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 FAM237AA0A1B0GTK4 181 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 ARHGAP6O43182 974 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 GNG11P61952 73 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 BAG1Q99933 345 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-205ENST00000571272 CNNM1Q9NRU3 951 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 FBXO3Q9UK99 471 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 WWC3Q9ULE0 1092 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 GUCY1A2P33402 732 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
SCARF1-205ENST00000571272 GRAMD1CQ8IYS0 662 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 KRI1Q8N9T8 703 aaKnown RBP20.05■□□□□ 0.8
SCARF1-205ENST00000571272 GREM2Q9H772 168 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 RIPOR2Q9Y4F9 1068 aa20.05■□□□□ 0.8
SCARF1-205ENST00000571272 PCDH11XQ9BZA7 1347 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 PCDH11YQ9BZA8 1340 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 ATP2B1P20020 1258 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 ITGA6P23229 1130 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 NFE2L3Q9Y4A8 694 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 ZRANB2O95218 330 aaKnown RBP eCLIP20.04■□□□□ 0.8
SCARF1-205ENST00000571272 PCCAP05165 728 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-205ENST00000571272 CSF1RP07333 972 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 PRR29P0C7W0 189 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 CTDSPL2Q05D32 466 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 TOGARAM2Q6ZUX3 1019 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 MAN1B1Q9UKM7 699 aa20.04■□□□□ 0.8
SCARF1-205ENST00000571272 MST1RQ04912 1400 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 POLR3GO15318 223 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 POLR2DO15514 142 aaKnown RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 SSRP1Q08945 709 aaKnown RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 TAF3Q5VWG9 929 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 IFIT3O14879 490 aaKnown RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 PDE6AP16499 860 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 MDM2Q00987 491 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 CMTR1Q8N1G2 835 aaKnown RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 AIDAQ96BJ3 306 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 TMEM87BQ96K49 555 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 DESI2Q9BSY9 194 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 SRRTQ9BXP5 876 aaKnown RBP20.03■□□□□ 0.8
SCARF1-205ENST00000571272 ZSWIM5Q9P217 1185 aa20.03■□□□□ 0.8
SCARF1-205ENST00000571272 EFCAB8A8MWE9 144 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 CASQ1P31415 396 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 PHKA1P46020 1223 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 NOSTRINQ8IVI9 506 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
SCARF1-205ENST00000571272 SERTAD1Q9UHV2 236 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 PKD1L3Q7Z443 1732 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
SCARF1-205ENST00000571272 POSTNQ15063 836 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 ZKSCAN3Q9BRR0 538 aa20.02■□□□□ 0.8
SCARF1-205ENST00000571272 CCDC66A2RUB6 948 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 RRP12Q5JTH9 1297 aaKnown RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TC2NQ8N9U0 490 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TEX35Q5T0J7 233 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 KIF6Q6ZMV9 814 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 FCHSD1Q86WN1 690 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 HELBQ8NG08 1087 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 SAMSN1Q9NSI8 373 aaKnown RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 KCPQ6ZWJ8 1503 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 ABCC12Q96J65 1359 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TBX2Q13207 712 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 KARSQ15046 597 aaKnown RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TTF1Q15361 905 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 UBE3CQ15386 1083 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 SPECC1LQ69YQ0 1117 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TTLL11Q8NHH1 800 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 STRBPQ96SI9 672 aaKnown RBP20.01■□□□□ 0.79
SCARF1-205ENST00000571272 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
SCARF1-205ENST00000571272 SGMS1Q86VZ5 419 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 MPHOSPH8Q99549 860 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 MYH7P12883 1935 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 DDX60Q8IY21 1712 aaKnown RBP20■□□□□ 0.79
SCARF1-205ENST00000571272 NR5A1Q13285 461 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 HLFQ16534 295 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 DNAJC10Q8IXB1 793 aa20■□□□□ 0.79
SCARF1-205ENST00000571272 HOOK1Q9UJC3 728 aaKnown RBP20■□□□□ 0.79
SCARF1-205ENST00000571272 MYO5AQ9Y4I1 1855 aaKnown RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 SAFBQ15424 915 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 USP49Q70CQ1 688 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 SMARCE1Q969G3 411 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 PLA2G12BQ9BX93 195 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 NAPBQ9H115 298 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 PCDHB6Q9Y5E3 794 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 AKAP11Q9UKA4 1901 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 STX10O60499 249 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms