RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 NOL9Q5SY16 702 aaKnown RBP25.45■■□□□ 1.66
LITAF-205ENST00000570904 ZSCAN29Q8IWY8 852 aaPredicted RBP25.45■■□□□ 1.66
LITAF-205ENST00000570904 NSUN4Q96CB9 384 aaKnown RBP25.45■■□□□ 1.66
LITAF-205ENST00000570904 PTPN22Q9Y2R2 807 aa25.45■■□□□ 1.66
LITAF-205ENST00000570904 FPGT-TNNI3KV9GXZ4 949 aa25.45■■□□□ 1.66
LITAF-205ENST00000570904 GPR75-ASB3A0A0A6YYF3 556 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 DDTLA6NHG4 134 aaPredicted RBP25.44■■□□□ 1.66
LITAF-205ENST00000570904 ZBTB7BO15156 539 aaPredicted RBP25.44■■□□□ 1.66
LITAF-205ENST00000570904 SURF6O75683 361 aaKnown RBP25.44■■□□□ 1.66
LITAF-205ENST00000570904 UQCRFS1P1P0C7P4 283 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 SLURP2P0DP57 97 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 RHBDL3P58872 404 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 DBNDD2Q9BQY9 259 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 RAI14Q9P0K7 980 aa25.44■■□□□ 1.66
LITAF-205ENST00000570904 ZCCHC17Q9NP64 241 aaKnown RBP25.43■■□□□ 1.66
LITAF-205ENST00000570904 GPR108Q9NPR9 543 aa25.43■■□□□ 1.66
LITAF-205ENST00000570904 SNRKQ9NRH2 765 aa25.43■■□□□ 1.66
LITAF-205ENST00000570904 KCNH4Q9UQ05 1017 aa25.43■■□□□ 1.66
LITAF-205ENST00000570904 CENPFP49454 3210 aa25.43■■□□□ 1.66
LITAF-205ENST00000570904 PHF20L1A8MW92 1017 aa25.42■■□□□ 1.66
LITAF-205ENST00000570904 GSTO1P78417 241 aa25.42■■□□□ 1.66
LITAF-205ENST00000570904 TTC39AQ5SRH9 613 aa25.42■■□□□ 1.66
LITAF-205ENST00000570904 TLR2O60603 784 aa25.41■■□□□ 1.66
LITAF-205ENST00000570904 PANK1Q8TE04 598 aa25.41■■□□□ 1.66
LITAF-205ENST00000570904 LDHCP07864 332 aa25.4■■□□□ 1.66
LITAF-205ENST00000570904 LRP2BPQ9P2M1 347 aa25.4■■□□□ 1.66
LITAF-205ENST00000570904 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
LITAF-205ENST00000570904 MOGSQ13724 837 aa25.39■■□□□ 1.66
LITAF-205ENST00000570904 CCDC158Q5M9N0 1113 aa25.39■■□□□ 1.66
LITAF-205ENST00000570904 ANKRD23Q86SG2 305 aa25.39■■□□□ 1.66
LITAF-205ENST00000570904 SCYL3Q8IZE3 742 aa25.39■■□□□ 1.66
LITAF-205ENST00000570904 MAP3K10Q02779 954 aa25.38■■□□□ 1.65
LITAF-205ENST00000570904 CEP85Q6P2H3 762 aa25.38■■□□□ 1.65
LITAF-205ENST00000570904 ARHGAP39Q9C0H5 1083 aa25.38■■□□□ 1.65
LITAF-205ENST00000570904 PICK1Q9NRD5 415 aa25.38■■□□□ 1.65
LITAF-205ENST00000570904 TLR7Q9NYK1 1049 aaKnown RBP25.38■■□□□ 1.65
LITAF-205ENST00000570904 PDHXO00330 501 aa25.37■■□□□ 1.65
LITAF-205ENST00000570904 DBNLQ9UJU6 430 aaKnown RBP25.37■■□□□ 1.65
LITAF-205ENST00000570904 ZHX2Q9Y6X8 837 aa25.37■■□□□ 1.65
LITAF-205ENST00000570904 PDE4DIPQ5VU43 2346 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 ZSWIM8A7E2V4 1837 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 PTPRAP18433 802 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 ARHGEF6Q15052 776 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 TEX11Q8IYF3 940 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 CCDC8Q9H0W5 538 aaPredicted RBP25.36■■□□□ 1.65
LITAF-205ENST00000570904 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.36■■□□□ 1.65
LITAF-205ENST00000570904 CPA4Q9UI42 421 aa25.36■■□□□ 1.65
LITAF-205ENST00000570904 FAM196BA6NMK8 535 aa25.35■■□□□ 1.65
LITAF-205ENST00000570904 CXCL11O14625 94 aa25.35■■□□□ 1.65
LITAF-205ENST00000570904 NPM3O75607 178 aaKnown RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 ECM2O94769 699 aaPredicted RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 MAP4K4O95819 1239 aaPredicted RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 CYP2E1P05181 493 aaPredicted RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 LACTBP83111 547 aaPredicted RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 NAA16Q6N069 864 aaPredicted RBP25.35■■□□□ 1.65
LITAF-205ENST00000570904 PTCH2Q9Y6C5 1203 aa25.35■■□□□ 1.65
LITAF-205ENST00000570904 MAST2Q6P0Q8 1798 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 POTEFA5A3E0 1075 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 ZAP70P43403 619 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 KIF22Q14807 665 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 GPAT2Q6NUI2 795 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 C17orf99Q6UX52 265 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 CCDC84Q86UT8 332 aaPredicted RBP25.34■■□□□ 1.65
LITAF-205ENST00000570904 SH3RF3Q8TEJ3 882 aaPredicted RBP25.34■■□□□ 1.65
LITAF-205ENST00000570904 ARMC5Q96C12 935 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 EAF2Q96CJ1 260 aaPredicted RBP25.34■■□□□ 1.65
LITAF-205ENST00000570904 OSBPL5Q9H0X9 879 aaPredicted RBP25.34■■□□□ 1.65
LITAF-205ENST00000570904 BRCA2P51587 3418 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 ADGRA2Q96PE1 1338 aa25.34■■□□□ 1.65
LITAF-205ENST00000570904 CTNND1O60716 968 aaKnown RBP25.33■■□□□ 1.65
LITAF-205ENST00000570904 DOCK1Q14185 1865 aa25.33■■□□□ 1.65
LITAF-205ENST00000570904 ZNF512BQ96KM6 892 aaPredicted RBP25.33■■□□□ 1.65
LITAF-205ENST00000570904 NOL10Q9BSC4 688 aaKnown RBP25.33■■□□□ 1.65
LITAF-205ENST00000570904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.33■■□□□ 1.653e-7■■■□□ 18
LITAF-205ENST00000570904 AATFQ9NY61 560 aaKnown RBP eCLIP25.33■■□□□ 1.65
LITAF-205ENST00000570904 EXOC6BQ9Y2D4 811 aa25.33■■□□□ 1.65
LITAF-205ENST00000570904 AFG3L2Q9Y4W6 797 aa25.33■■□□□ 1.65
LITAF-205ENST00000570904 A0A0G2JLL6 359 aaPredicted RBP25.32■■□□□ 1.64
LITAF-205ENST00000570904 PRRT2Q7Z6L0 340 aaPredicted RBP25.32■■□□□ 1.64
LITAF-205ENST00000570904 ADGRA1Q86SQ6 560 aa25.32■■□□□ 1.64
LITAF-205ENST00000570904 PIH1D3Q9NQM4 214 aaKnown RBP25.32■■□□□ 1.64
LITAF-205ENST00000570904 COL2A1P02458 1487 aaPredicted RBP25.32■■□□□ 1.64
LITAF-205ENST00000570904 TBC1D12O60347 775 aa25.31■■□□□ 1.64
LITAF-205ENST00000570904 GADL1Q6ZQY3 521 aa25.31■■□□□ 1.64
LITAF-205ENST00000570904 PARK7Q99497 189 aaKnown RBP25.31■■□□□ 1.64
LITAF-205ENST00000570904 TRIM75PA6NK02 468 aa25.3■■□□□ 1.64
LITAF-205ENST00000570904 BAG3O95817 575 aa25.3■■□□□ 1.64
LITAF-205ENST00000570904 CYP2C8P10632 490 aa25.3■■□□□ 1.64
LITAF-205ENST00000570904 CTGFP29279 349 aa25.3■■□□□ 1.64
LITAF-205ENST00000570904 SLC9C1Q4G0N8 1177 aa25.3■■□□□ 1.64
LITAF-205ENST00000570904 FASTKD5Q7L8L6 764 aaKnown RBP25.29■■□□□ 1.64
LITAF-205ENST00000570904 ZNF333Q96JL9 665 aa25.29■■□□□ 1.64
LITAF-205ENST00000570904 NDUFB9Q9Y6M9 179 aa25.29■■□□□ 1.64
LITAF-205ENST00000570904 MKI67P46013 3256 aaKnown RBP25.29■■□□□ 1.64
LITAF-205ENST00000570904 MYO5AQ9Y4I1 1855 aaKnown RBP25.28■■□□□ 1.64
LITAF-205ENST00000570904 MS4A1P11836 297 aa25.28■■□□□ 1.64
LITAF-205ENST00000570904 MAPKAPK5Q8IW41 473 aa25.28■■□□□ 1.64
LITAF-205ENST00000570904 TGFBRAP1Q8WUH2 860 aa25.28■■□□□ 1.64
LITAF-205ENST00000570904 PHIPQ8WWQ0 1821 aa25.28■■□□□ 1.64
LITAF-205ENST00000570904 KIAA0100Q14667 2235 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms