RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
CDT1-203ENST00000569140 SLFNL1Q499Z3 407 aa15.49■□□□□ 0.07
CDT1-203ENST00000569140 PI4K2BQ8TCG2 481 aa15.49■□□□□ 0.07
CDT1-203ENST00000569140 HHIPL1Q96JK4 782 aa15.49■□□□□ 0.07
CDT1-203ENST00000569140 FSD1Q9BTV5 496 aa15.49■□□□□ 0.07
CDT1-203ENST00000569140 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
CDT1-203ENST00000569140 USP2O75604 605 aaPredicted RBP15.48■□□□□ 0.07
CDT1-203ENST00000569140 ADD2P35612 726 aa15.48■□□□□ 0.07
CDT1-203ENST00000569140 PDE1AP54750 535 aa15.48■□□□□ 0.07
CDT1-203ENST00000569140 SLC4A8Q2Y0W8 1093 aa15.48■□□□□ 0.07
CDT1-203ENST00000569140 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
CDT1-203ENST00000569140 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
CDT1-203ENST00000569140 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
CDT1-203ENST00000569140 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
CDT1-203ENST00000569140 MYH7P12883 1935 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 PPP4CP60510 307 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
CDT1-203ENST00000569140 RASAL3Q86YV0 1011 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 SLC10A4Q96EP9 437 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 CSADQ9Y600 493 aa15.47■□□□□ 0.07
CDT1-203ENST00000569140 FLT1P17948 1338 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 SALL3Q9BXA9 1300 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 TCRBV5S4A2TA0A5A2 114 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 DDTLA6NHG4 134 aaPredicted RBP15.46■□□□□ 0.07
CDT1-203ENST00000569140 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 MBD4O95243 580 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 CHGBP05060 677 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 SLC10A3P09131 477 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 LRRFIP1Q32MZ4 808 aaKnown RBP15.46■□□□□ 0.07
CDT1-203ENST00000569140 ANKRD13AQ8IZ07 590 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
CDT1-203ENST00000569140 ARMT1Q9H993 441 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
CDT1-203ENST00000569140 OTOFQ9HC10 1997 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 NOGQ13253 232 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 SH3BP5LQ7L8J4 393 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 LCORLQ8N3X6 602 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
CDT1-203ENST00000569140 CDK5RAP2Q96SN8 1893 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 FAM196BA6NMK8 535 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 RNF113AO15541 343 aaKnown RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 ZFYP08048 801 aaPredicted RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 VGLL4Q14135 290 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 LDLRAD1Q5T700 205 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 JMYQ8N9B5 988 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDT1-203ENST00000569140 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 CCDC136Q96JN2 1154 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
CDT1-203ENST00000569140 BEGAINQ9BUH8 593 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDT1-203ENST00000569140 PALD1Q9ULE6 856 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 FOCADQ5VW36 1801 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
CDT1-203ENST00000569140 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
CDT1-203ENST00000569140 KIF23Q02241 960 aaPredicted RBP15.43■□□□□ 0.06
CDT1-203ENST00000569140 PLEKHM2Q8IWE5 1019 aa15.43■□□□□ 0.06
CDT1-203ENST00000569140 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
CDT1-203ENST00000569140 EVI5LQ96CN4 794 aa15.43■□□□□ 0.06
CDT1-203ENST00000569140 ATRNL1Q5VV63 1379 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 POLR3DP05423 398 aaPredicted RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 SLURP2P0DP57 97 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 INPP5BP32019 993 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 MAP2K2P36507 400 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 MAP2K1Q02750 393 aaPredicted RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 APPBP2Q92624 585 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 OTUD5Q96G74 571 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 DDRGK1Q96HY6 314 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 WNK4Q96J92 1243 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
CDT1-203ENST00000569140 SLC4A4Q9Y6R1 1079 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 THSD7BQ9C0I4 1608 aa15.42■□□□□ 0.06
CDT1-203ENST00000569140 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 COL2A1P02458 1487 aaPredicted RBP15.41■□□□□ 0.06
CDT1-203ENST00000569140 PRKAB2O43741 272 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 SPRYD7Q5W111 196 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
CDT1-203ENST00000569140 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
CDT1-203ENST00000569140 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 PI4KBQ9UBF8 816 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 MYH1P12882 1939 aa15.41■□□□□ 0.06
CDT1-203ENST00000569140 UNCXA6NJT0 531 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms