RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
LYRM1-210ENST00000568820 DDX49Q9Y6V7 483 aaKnown RBP13.23□□□□□ -0.29
LYRM1-210ENST00000568820 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 E7EWF7 191 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 ZNF213O14771 459 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 LARGE1O95461 756 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 PDE6AP16499 860 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 GJB2P29033 226 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
LYRM1-210ENST00000568820 KMT5BQ4FZB7 885 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 Q6ZUG5 572 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 ZNF532Q9HCE3 1301 aa13.22□□□□□ -0.29
LYRM1-210ENST00000568820 FGAP02671 866 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 ZSCAN22P10073 491 aaPredicted RBP13.21□□□□□ -0.29
LYRM1-210ENST00000568820 SYT1P21579 422 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 TAF1LQ8IZX4 1826 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.29
LYRM1-210ENST00000568820 GNAT2P19087 354 aa13.21□□□□□ -0.3
LYRM1-210ENST00000568820 EXOSC10Q01780 885 aaKnown RBP13.21□□□□□ -0.3
LYRM1-210ENST00000568820 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.3
LYRM1-210ENST00000568820 AGXT2Q9BYV1 514 aa13.21□□□□□ -0.3
LYRM1-210ENST00000568820 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.3
LYRM1-210ENST00000568820 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.3
LYRM1-210ENST00000568820 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.3
LYRM1-210ENST00000568820 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
LYRM1-210ENST00000568820 ZMYM6O95789 1325 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 MBD3O95983 291 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
LYRM1-210ENST00000568820 TRDNQ13061 729 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 STOX1Q6ZVD7 989 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
LYRM1-210ENST00000568820 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 NCOA7Q8NI08 942 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 BRF1Q92994 677 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 GTF3C6Q969F1 213 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
LYRM1-210ENST00000568820 LRRC4BQ9NT99 713 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 DENND2AQ9ULE3 1009 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
LYRM1-210ENST00000568820 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 APPP05067 770 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 GCGRP47871 477 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 ALX1Q15699 326 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 FOXD4L5Q5VV16 416 aaPredicted RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 MAGEB6Q8N7X4 407 aa13.19□□□□□ -0.3
LYRM1-210ENST00000568820 FOXD4L4Q8WXT5 416 aaPredicted RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
LYRM1-210ENST00000568820 MYH7P12883 1935 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 SNAP23O00161 211 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 F13A1P00488 732 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 MCM5P33992 734 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 NFIXQ14938 502 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 NACAP1Q9BZK3 213 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 FOXP2O15409 715 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 PFKFB2O60825 505 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 IGSF3O75054 1194 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 SSTR3P32745 418 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 ST5P78524 1137 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 HMGN5P82970 282 aaKnown RBP13.18□□□□□ -0.3
LYRM1-210ENST00000568820 ST3GAL1Q11201 340 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
LYRM1-210ENST00000568820 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
LYRM1-210ENST00000568820 TRIM37O94972 964 aa13.17□□□□□ -0.3
LYRM1-210ENST00000568820 STK3Q13188 491 aa13.17□□□□□ -0.3
LYRM1-210ENST00000568820 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
LYRM1-210ENST00000568820 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
LYRM1-210ENST00000568820 GYG1P46976 350 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 EVCP57679 992 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 HAND2P61296 217 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
LYRM1-210ENST00000568820 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 NAPBQ9H115 298 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 MTMR6Q9Y217 621 aa13.16□□□□□ -0.3
LYRM1-210ENST00000568820 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 MBD4O95243 580 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms