RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
SPSB3-210ENST00000568416 NSUN4Q96CB9 384 aaKnown RBP23.3■■□□□ 1.32
SPSB3-210ENST00000568416 C1orf115Q9H7X2 142 aa23.3■■□□□ 1.32
SPSB3-210ENST00000568416 DDTLA6NHG4 134 aaPredicted RBP23.29■■□□□ 1.32
SPSB3-210ENST00000568416 PHF20L1A8MW92 1017 aa23.29■■□□□ 1.32
SPSB3-210ENST00000568416 TNNI3KQ59H18 835 aa23.29■■□□□ 1.32
SPSB3-210ENST00000568416 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
SPSB3-210ENST00000568416 FPGT-TNNI3KV9GXZ4 949 aa23.29■■□□□ 1.32
SPSB3-210ENST00000568416 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
SPSB3-210ENST00000568416 LDHCP07864 332 aa23.28■■□□□ 1.32
SPSB3-210ENST00000568416 GSTO1P78417 241 aa23.28■■□□□ 1.32
SPSB3-210ENST00000568416 PICALMQ13492 652 aa23.28■■□□□ 1.32
SPSB3-210ENST00000568416 ANKRD23Q86SG2 305 aa23.28■■□□□ 1.32
SPSB3-210ENST00000568416 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
SPSB3-210ENST00000568416 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
SPSB3-210ENST00000568416 NPM3O75607 178 aaKnown RBP23.27■■□□□ 1.32
SPSB3-210ENST00000568416 SURF6O75683 361 aaKnown RBP23.27■■□□□ 1.32
SPSB3-210ENST00000568416 MOGSQ13724 837 aa23.27■■□□□ 1.32
SPSB3-210ENST00000568416 SCYL3Q8IZE3 742 aa23.27■■□□□ 1.32
SPSB3-210ENST00000568416 DBNDD2Q9BQY9 259 aa23.27■■□□□ 1.32
SPSB3-210ENST00000568416 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
SPSB3-210ENST00000568416 MAP4K4O95819 1239 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-210ENST00000568416 OS9Q13438 667 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-210ENST00000568416 ARHGEF6Q15052 776 aa23.26■■□□□ 1.31
SPSB3-210ENST00000568416 DOCK2Q92608 1830 aa23.26■■□□□ 1.31
SPSB3-210ENST00000568416 CXCL11O14625 94 aa23.25■■□□□ 1.31
SPSB3-210ENST00000568416 SLURP2P0DP57 97 aa23.25■■□□□ 1.31
SPSB3-210ENST00000568416 ARMC5Q96C12 935 aa23.25■■□□□ 1.31
SPSB3-210ENST00000568416 PDHXO00330 501 aa23.24■■□□□ 1.31
SPSB3-210ENST00000568416 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
SPSB3-210ENST00000568416 TTC39AQ5SRH9 613 aa23.24■■□□□ 1.31
SPSB3-210ENST00000568416 C17orf99Q6UX52 265 aa23.24■■□□□ 1.31
SPSB3-210ENST00000568416 LRP2BPQ9P2M1 347 aa23.24■■□□□ 1.31
SPSB3-210ENST00000568416 PTPRAP18433 802 aa23.23■■□□□ 1.31
SPSB3-210ENST00000568416 LACTBP83111 547 aaPredicted RBP23.23■■□□□ 1.31
SPSB3-210ENST00000568416 ZNF512BQ96KM6 892 aaPredicted RBP23.23■■□□□ 1.31
SPSB3-210ENST00000568416 SNRKQ9NRH2 765 aa23.23■■□□□ 1.31
SPSB3-210ENST00000568416 ADGRA2Q96PE1 1338 aa23.23■■□□□ 1.31
SPSB3-210ENST00000568416 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
SPSB3-210ENST00000568416 TBC1D12O60347 775 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 CTNND1O60716 968 aaKnown RBP23.22■■□□□ 1.31
SPSB3-210ENST00000568416 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 ARHGAP39Q9C0H5 1083 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 PICK1Q9NRD5 415 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 PTCH2Q9Y6C5 1203 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 ZHX2Q9Y6X8 837 aa23.22■■□□□ 1.31
SPSB3-210ENST00000568416 A0A0G2JLL6 359 aaPredicted RBP23.21■■□□□ 1.31
SPSB3-210ENST00000568416 KIF22Q14807 665 aa23.21■■□□□ 1.31
SPSB3-210ENST00000568416 PRRT2Q7Z6L0 340 aaPredicted RBP23.21■■□□□ 1.31
SPSB3-210ENST00000568416 OSBPL5Q9H0X9 879 aaPredicted RBP23.21■■□□□ 1.31
SPSB3-210ENST00000568416 CPA4Q9UI42 421 aa23.21■■□□□ 1.31
SPSB3-210ENST00000568416 DBNLQ9UJU6 430 aaKnown RBP23.21■■□□□ 1.31
SPSB3-210ENST00000568416 AFG3L2Q9Y4W6 797 aa23.21■■□□□ 1.31
SPSB3-210ENST00000568416 POTEFA5A3E0 1075 aa23.2■■□□□ 1.3
SPSB3-210ENST00000568416 CYP2E1P05181 493 aaPredicted RBP23.2■■□□□ 1.3
SPSB3-210ENST00000568416 PANK1Q8TE04 598 aa23.2■■□□□ 1.3
SPSB3-210ENST00000568416 TLR7Q9NYK1 1049 aaKnown RBP23.2■■□□□ 1.3
SPSB3-210ENST00000568416 AK9Q5TCS8 1911 aa23.2■■□□□ 1.3
SPSB3-210ENST00000568416 IGSF3O75054 1194 aa23.19■■□□□ 1.3
SPSB3-210ENST00000568416 NAA16Q6N069 864 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-210ENST00000568416 TEX11Q8IYF3 940 aa23.19■■□□□ 1.3
SPSB3-210ENST00000568416 SH3RF3Q8TEJ3 882 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-210ENST00000568416 EAF2Q96CJ1 260 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-210ENST00000568416 GNRH1P01148 92 aa23.18■■□□□ 1.3
SPSB3-210ENST00000568416 ZAP70P43403 619 aa23.18■■□□□ 1.3
SPSB3-210ENST00000568416 FASTKD5Q7L8L6 764 aaKnown RBP23.18■■□□□ 1.3
SPSB3-210ENST00000568416 ZNF333Q96JL9 665 aa23.18■■□□□ 1.3
SPSB3-210ENST00000568416 PARK7Q99497 189 aaKnown RBP23.18■■□□□ 1.3
SPSB3-210ENST00000568416 NOL10Q9BSC4 688 aaKnown RBP23.18■■□□□ 1.3
SPSB3-210ENST00000568416 CCDC8Q9H0W5 538 aaPredicted RBP23.18■■□□□ 1.3
SPSB3-210ENST00000568416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.18■■□□□ 1.3
SPSB3-210ENST00000568416 FAM196BA6NMK8 535 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 CTGFP29279 349 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 PRMT2P55345 433 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 PPP4CP60510 307 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 SLC9C1Q4G0N8 1177 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 PIH1D3Q9NQM4 214 aaKnown RBP23.17■■□□□ 1.3
SPSB3-210ENST00000568416 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPSB3-210ENST00000568416 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-210ENST00000568416 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
SPSB3-210ENST00000568416 BAG3O95817 575 aa23.16■■□□□ 1.3
SPSB3-210ENST00000568416 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
SPSB3-210ENST00000568416 ZSWIM8A7E2V4 1837 aa23.16■■□□□ 1.3
SPSB3-210ENST00000568416 TNRC18O15417 2968 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-210ENST00000568416 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 CYP2C8P10632 490 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 BCRP11274 1271 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 PLCG2P16885 1265 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 GADL1Q6ZQY3 521 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 NBPF11Q86T75 865 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 CCDC84Q86UT8 332 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-210ENST00000568416 EXOC6BQ9Y2D4 811 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 SLC45A1Q9Y2W3 748 aa23.15■■□□□ 1.3
SPSB3-210ENST00000568416 MS4A1P11836 297 aa23.14■■□□□ 1.29
SPSB3-210ENST00000568416 PSMC4P43686 418 aa23.14■■□□□ 1.29
SPSB3-210ENST00000568416 PRPF38BQ5VTL8 546 aaKnown RBP23.14■■□□□ 1.29
SPSB3-210ENST00000568416 ERC1Q8IUD2 1116 aa23.14■■□□□ 1.29
SPSB3-210ENST00000568416 TRIM47Q96LD4 638 aa23.14■■□□□ 1.29
SPSB3-210ENST00000568416 HTTP42858 3142 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms