RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 ATP6V1DQ9Y5K8 247 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
SMG1-215ENST00000568239 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 LDHCP07864 332 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 SART3Q15020 963 aaKnown RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 SKOR2Q2VWA4 1001 aaPredicted RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 UBAC1Q9BSL1 405 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 DBNDD1Q9H9R9 158 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 CCDC69A6NI79 296 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 SH2B2O14492 632 aaPredicted RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 FIBPO43427 364 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 EVX2Q03828 476 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 CTR9Q6PD62 1173 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 SH3RF3Q8TEJ3 882 aaPredicted RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 TGFBRAP1Q8WUH2 860 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 TMEM87BQ96K49 555 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 COA1Q9GZY4 146 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 LMBRD1Q9NUN5 540 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 CNPY2Q9Y2B0 182 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 RGPD3A6NKT7 1758 aaPredicted RBP8.29□□□□□ -1.08
SMG1-215ENST00000568239 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 NRXN2Q9P2S2 1712 aa8.29□□□□□ -1.08
SMG1-215ENST00000568239 DHX16O60231 1041 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG1-215ENST00000568239 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 FAM173BQ6P4H8 233 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 SYNE3Q6ZMZ3 975 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 TBC1D22AQ8WUA7 517 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 ESR2Q92731 530 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 LLPHQ9BRT6 129 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 MXD3Q9BW11 206 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 ATP8A2Q9NTI2 1148 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 KIF3AQ9Y496 699 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 SLC12A7Q9Y666 1083 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 WDR19Q8NEZ3 1342 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 COL11A2P13942 1736 aaPredicted RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 MYH2Q9UKX2 1941 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 ZBTB43O43298 467 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 CYP2D6P10635 497 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 BTDP43251 543 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 HMGN5P82970 282 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 DNM1Q05193 864 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 WTAPQ15007 396 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 MAPKAPK5Q8IW41 473 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 FBXL16Q8N461 479 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 IGDCC4Q8TDY8 1250 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 CHMP4CQ96CF2 233 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 EYA3Q99504 573 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 ZBTB7AO95365 584 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 STYK1Q6J9G0 422 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 APOA5Q6Q788 366 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 LY9Q9HBG7 655 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 PPP1R1BQ9UD71 204 aaPredicted RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
SMG1-215ENST00000568239 HPS5Q9UPZ3 1129 aa8.28□□□□□ -1.08
SMG1-215ENST00000568239 C21orf2O43822 256 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 EVCP57679 992 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 CAVIN1Q6NZI2 390 aaKnown RBP8.27□□□□□ -1.09
SMG1-215ENST00000568239 GIMAP6Q6P9H5 292 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 ARPP21Q9UBL0 812 aaPredicted RBP8.27□□□□□ -1.09
SMG1-215ENST00000568239 TTF2Q9UNY4 1162 aaKnown RBP8.27□□□□□ -1.09
SMG1-215ENST00000568239 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 POLR3DP05423 398 aaPredicted RBP8.27□□□□□ -1.09
SMG1-215ENST00000568239 SCNN1DP51172 638 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 IQCA1Q86XH1 822 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 TEX11Q8IYF3 940 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 CCDC82Q8N4S0 544 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 KCNQ5Q9NR82 932 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 ORC3Q9UBD5 711 aaPredicted RBP8.27□□□□□ -1.09
SMG1-215ENST00000568239 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 SLX4Q8IY92 1834 aa8.27□□□□□ -1.09
SMG1-215ENST00000568239 TNKSO95271 1327 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
SMG1-215ENST00000568239 PDE4BQ07343 736 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 KLHL40Q2TBA0 621 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 FAM47AQ5JRC9 791 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 CPLX2Q6PUV4 134 aaKnown RBP8.26□□□□□ -1.09
SMG1-215ENST00000568239 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
SMG1-215ENST00000568239 ATF5Q9Y2D1 282 aaPredicted RBP8.26□□□□□ -1.09
SMG1-215ENST00000568239 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 TSPY2A6NKD2 308 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 LIFRP42702 1097 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 PICALMQ13492 652 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 AOC3Q16853 763 aa8.26□□□□□ -1.09
SMG1-215ENST00000568239 OTUD7BQ6GQQ9 843 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms