RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 DCAF15Q66K64 600 aa26.24■■□□□ 1.79
NME3-210ENST00000567271 ANKRD13AQ8IZ07 590 aa26.24■■□□□ 1.79
NME3-210ENST00000567271 CLMNQ96JQ2 1002 aa26.24■■□□□ 1.79
NME3-210ENST00000567271 WBP1LQ9NX94 342 aa26.24■■□□□ 1.79
NME3-210ENST00000567271 DDTLA6NHG4 134 aaPredicted RBP26.23■■□□□ 1.79
NME3-210ENST00000567271 MX1P20591 662 aa26.23■■□□□ 1.79
NME3-210ENST00000567271 MIGA2Q7L4E1 593 aa26.23■■□□□ 1.79
NME3-210ENST00000567271 MIGA1Q8NAN2 632 aa26.23■■□□□ 1.79
NME3-210ENST00000567271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.23■■□□□ 1.792e-7■■■■□ 21.2
NME3-210ENST00000567271 SLC10A4Q96EP9 437 aa26.23■■□□□ 1.79
NME3-210ENST00000567271 ZNF532Q9HCE3 1301 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 TCRBV5S4A2TA0A5A2 114 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 ERC2O15083 957 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 HSPA1AP0DMV8 641 aaKnown RBP26.22■■□□□ 1.79
NME3-210ENST00000567271 HSPA1BP0DMV9 641 aaKnown RBP26.22■■□□□ 1.79
NME3-210ENST00000567271 MAP3K9P80192 1104 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 KIF23Q02241 960 aaPredicted RBP26.22■■□□□ 1.79
NME3-210ENST00000567271 B4GALNT3Q6L9W6 998 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 CERS3Q8IU89 383 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 ZSCAN29Q8IWY8 852 aaPredicted RBP26.22■■□□□ 1.79
NME3-210ENST00000567271 PI4K2BQ8TCG2 481 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 CSRNP1Q96S65 589 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 ZNF341Q9BYN7 854 aa26.22■■□□□ 1.79
NME3-210ENST00000567271 ADD2P35612 726 aa26.21■■□□□ 1.79
NME3-210ENST00000567271 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
NME3-210ENST00000567271 TGFBRAP1Q8WUH2 860 aa26.21■■□□□ 1.79
NME3-210ENST00000567271 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.21■■□□□ 1.795e-32■■■■□ 24.1
NME3-210ENST00000567271 OSBPL5Q9H0X9 879 aaPredicted RBP26.21■■□□□ 1.79
NME3-210ENST00000567271 ATRNL1Q5VV63 1379 aa26.2■■□□□ 1.79
NME3-210ENST00000567271 GLRX3O76003 335 aaKnown RBP26.2■■□□□ 1.78
NME3-210ENST00000567271 NUCB1Q02818 461 aa26.2■■□□□ 1.78
NME3-210ENST00000567271 RIOK1Q9BRS2 568 aaKnown RBP26.2■■□□□ 1.78
NME3-210ENST00000567271 LNPKQ9C0E8 428 aa26.2■■□□□ 1.78
NME3-210ENST00000567271 AK9Q5TCS8 1911 aa26.2■■□□□ 1.78
NME3-210ENST00000567271 COL2A1P02458 1487 aaPredicted RBP26.19■■□□□ 1.78
NME3-210ENST00000567271 SPRYD7Q5W111 196 aa26.19■■□□□ 1.78
NME3-210ENST00000567271 MAPKAPK5Q8IW41 473 aa26.19■■□□□ 1.78
NME3-210ENST00000567271 WRNIP1Q96S55 665 aa26.19■■□□□ 1.78
NME3-210ENST00000567271 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.19■■□□□ 1.78
NME3-210ENST00000567271 STAP2Q9UGK3 403 aa26.19■■□□□ 1.78
NME3-210ENST00000567271 ZNF112Q9UJU3 913 aa26.19■■□□□ 1.78
NME3-210ENST00000567271 MAGEB6P1A0A0J9YX57 407 aa26.18■■□□□ 1.78
NME3-210ENST00000567271 MAP3K10Q02779 954 aa26.18■■□□□ 1.78
NME3-210ENST00000567271 VGLL4Q14135 290 aa26.18■■□□□ 1.78
NME3-210ENST00000567271 ZSCAN25Q6NSZ9 544 aa26.18■■□□□ 1.78
NME3-210ENST00000567271 CHD1LQ86WJ1 897 aa26.18■■□□□ 1.78
NME3-210ENST00000567271 FLT1P17948 1338 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 UBE3CQ15386 1083 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 SLFNL1Q499Z3 407 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 KBTBD3Q8NAB2 608 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 ZKSCAN4Q969J2 545 aaPredicted RBP26.17■■□□□ 1.78
NME3-210ENST00000567271 ELP3Q9H9T3 547 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 CSADQ9Y600 493 aa26.17■■□□□ 1.78
NME3-210ENST00000567271 OTOFQ9HC10 1997 aa26.16■■□□□ 1.78
NME3-210ENST00000567271 CHGBP05060 677 aa26.16■■□□□ 1.78
NME3-210ENST00000567271 PDE1AP54750 535 aa26.16■■□□□ 1.78
NME3-210ENST00000567271 MKRN3Q13064 507 aaKnown RBP26.16■■□□□ 1.78
NME3-210ENST00000567271 REM2Q8IYK8 340 aaPredicted RBP26.16■■□□□ 1.78
NME3-210ENST00000567271 AIDAQ96BJ3 306 aa26.16■■□□□ 1.78
NME3-210ENST00000567271 WNK4Q96J92 1243 aa26.16■■□□□ 1.78
NME3-210ENST00000567271 DHX36Q9H2U1 1008 aaKnown RBP26.16■■□□□ 1.78
NME3-210ENST00000567271 TBC1D12O60347 775 aa26.15■■□□□ 1.78
NME3-210ENST00000567271 ZBTB48P10074 688 aaPredicted RBP26.15■■□□□ 1.78
NME3-210ENST00000567271 BEGAINQ9BUH8 593 aa26.15■■□□□ 1.78
NME3-210ENST00000567271 PHF20L1A8MW92 1017 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 FOXN1O15353 648 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 SLURP2P0DP57 97 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 INPP5BP32019 993 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 SNCAIPQ9Y6H5 919 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 CDK5RAP2Q96SN8 1893 aa26.14■■□□□ 1.78
NME3-210ENST00000567271 GJA5P36382 358 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 USP5P45974 858 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 LCORLQ8N3X6 602 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 OPTNQ96CV9 577 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 PI4KBQ9UBF8 816 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 FOCADQ5VW36 1801 aa26.13■■□□□ 1.77
NME3-210ENST00000567271 CNKSR2Q8WXI2 1034 aa26.12■■□□□ 1.77
NME3-210ENST00000567271 CRNKL1Q9BZJ0 848 aaKnown RBP26.12■■□□□ 1.77
NME3-210ENST00000567271 ARMT1Q9H993 441 aa26.12■■□□□ 1.77
NME3-210ENST00000567271 PALD1Q9ULE6 856 aa26.12■■□□□ 1.77
NME3-210ENST00000567271 SPDYE5A6NIY4 337 aa26.11■■□□□ 1.77
NME3-210ENST00000567271 TM4SF4P48230 202 aa26.11■■□□□ 1.77
NME3-210ENST00000567271 NOL9Q5SY16 702 aaKnown RBP26.11■■□□□ 1.77
NME3-210ENST00000567271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.11■■□□□ 1.77
NME3-210ENST00000567271 SAP30BPQ9UHR5 308 aaKnown RBP26.11■■□□□ 1.77
NME3-210ENST00000567271 MYH7P12883 1935 aa26.1■■□□□ 1.77
NME3-210ENST00000567271 RNF113AO15541 343 aaKnown RBP26.1■■□□□ 1.77
NME3-210ENST00000567271 MBD4O95243 580 aa26.1■■□□□ 1.77
NME3-210ENST00000567271 ZFYP08048 801 aaPredicted RBP26.1■■□□□ 1.77
NME3-210ENST00000567271 ERO1BQ86YB8 467 aa26.1■■□□□ 1.77
NME3-210ENST00000567271 PLEKHM2Q8IWE5 1019 aa26.1■■□□□ 1.77
NME3-210ENST00000567271 PUS7LQ9H0K6 701 aaKnown RBP26.1■■□□□ 1.77
NME3-210ENST00000567271 HERC5Q9UII4 1024 aaKnown RBP26.1■■□□□ 1.77
NME3-210ENST00000567271 MANSC4A6NHS7 340 aaPredicted RBP26.09■■□□□ 1.77
NME3-210ENST00000567271 FAM196BA6NMK8 535 aa26.09■■□□□ 1.77
NME3-210ENST00000567271 CA12O43570 354 aa26.09■■□□□ 1.77
NME3-210ENST00000567271 SREBF2Q12772 1141 aa26.09■■□□□ 1.77
NME3-210ENST00000567271 LRRFIP1Q32MZ4 808 aaKnown RBP26.09■■□□□ 1.77
NME3-210ENST00000567271 METTL16Q86W50 562 aaKnown RBP26.09■■□□□ 1.77
NME3-210ENST00000567271 FOXP4Q8IVH2 680 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms