RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 OTOFQ9HC10 1997 aa23.21■■□□□ 1.31
CPNE7-208ENST00000566398 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
CPNE7-208ENST00000566398 TESPA1A2RU30 521 aaPredicted RBP23.2■■□□□ 1.3
CPNE7-208ENST00000566398 IGSF3O75054 1194 aa23.2■■□□□ 1.3
CPNE7-208ENST00000566398 RAB11FIP3O75154 756 aa23.2■■□□□ 1.3
CPNE7-208ENST00000566398 GTF2A2P52657 109 aa23.2■■□□□ 1.3
CPNE7-208ENST00000566398 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
CPNE7-208ENST00000566398 GPR25O00155 361 aa23.19■■□□□ 1.3
CPNE7-208ENST00000566398 INPP5BP32019 993 aa23.19■■□□□ 1.3
CPNE7-208ENST00000566398 ZNF296Q8WUU4 475 aaPredicted RBP23.19■■□□□ 1.3
CPNE7-208ENST00000566398 MS4A4AQ96JQ5 239 aa23.19■■□□□ 1.3
CPNE7-208ENST00000566398 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
CPNE7-208ENST00000566398 PIH1D3Q9NQM4 214 aaKnown RBP23.19■■□□□ 1.3
CPNE7-208ENST00000566398 ZNF112Q9UJU3 913 aa23.19■■□□□ 1.3
CPNE7-208ENST00000566398 AKAP11Q9UKA4 1901 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 CCL15-CCL14A0A0B4J2E2 113 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 NPM3O75607 178 aaKnown RBP23.18■■□□□ 1.3
CPNE7-208ENST00000566398 BAG3O95817 575 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 CCL15Q16663 113 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 SH3BP5LQ7L8J4 393 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 TEX11Q8IYF3 940 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 BRI3BPQ8WY22 251 aa23.18■■□□□ 1.3
CPNE7-208ENST00000566398 DDTLA6NHG4 134 aaPredicted RBP23.17■■□□□ 1.3
CPNE7-208ENST00000566398 IFIT2P09913 472 aaKnown RBP23.17■■□□□ 1.3
CPNE7-208ENST00000566398 PPIL2Q13356 520 aa23.17■■□□□ 1.3
CPNE7-208ENST00000566398 CTU1Q7Z7A3 348 aaKnown RBP23.17■■□□□ 1.3
CPNE7-208ENST00000566398 PTPN18Q99952 460 aa23.17■■□□□ 1.3
CPNE7-208ENST00000566398 R3HDMLQ9H3Y0 253 aa23.17■■□□□ 1.3
CPNE7-208ENST00000566398 MYH2Q9UKX2 1941 aa23.16■■□□□ 1.3
CPNE7-208ENST00000566398 IDH1O75874 414 aaKnown RBP23.16■■□□□ 1.3
CPNE7-208ENST00000566398 PLCG2P16885 1265 aa23.16■■□□□ 1.3
CPNE7-208ENST00000566398 PPATQ06203 517 aa23.16■■□□□ 1.3
CPNE7-208ENST00000566398 SNAPC2Q13487 334 aa23.16■■□□□ 1.3
CPNE7-208ENST00000566398 NOL9Q5SY16 702 aaKnown RBP23.16■■□□□ 1.3
CPNE7-208ENST00000566398 SH3RF3Q8TEJ3 882 aaPredicted RBP23.16■■□□□ 1.3
CPNE7-208ENST00000566398 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
CPNE7-208ENST00000566398 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
CPNE7-208ENST00000566398 IRF6O14896 467 aa23.15■■□□□ 1.3
CPNE7-208ENST00000566398 FKTNO75072 461 aa23.15■■□□□ 1.3
CPNE7-208ENST00000566398 CETPP11597 493 aa23.15■■□□□ 1.3
CPNE7-208ENST00000566398 OSBPL5Q9H0X9 879 aaPredicted RBP23.15■■□□□ 1.3
CPNE7-208ENST00000566398 NDUFB9Q9Y6M9 179 aa23.15■■□□□ 1.3
CPNE7-208ENST00000566398 COL2A1P02458 1487 aaPredicted RBP23.14■■□□□ 1.29
CPNE7-208ENST00000566398 CRHR2Q13324 411 aa23.14■■□□□ 1.29
CPNE7-208ENST00000566398 ADGRA1Q86SQ6 560 aa23.14■■□□□ 1.29
CPNE7-208ENST00000566398 CASP8AP2Q9UKL3 1982 aa23.14■■□□□ 1.29
CPNE7-208ENST00000566398 MAST2Q6P0Q8 1798 aa23.14■■□□□ 1.29
CPNE7-208ENST00000566398 PHF20L1A8MW92 1017 aa23.13■■□□□ 1.29
CPNE7-208ENST00000566398 CYP7A1P22680 504 aa23.13■■□□□ 1.29
CPNE7-208ENST00000566398 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
CPNE7-208ENST00000566398 PPP4CP60510 307 aa23.13■■□□□ 1.29
CPNE7-208ENST00000566398 MAP3K12Q12852 859 aa23.13■■□□□ 1.29
CPNE7-208ENST00000566398 MAP3K10Q02779 954 aa23.12■■□□□ 1.29
CPNE7-208ENST00000566398 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
CPNE7-208ENST00000566398 ANTXR1Q9H6X2 564 aa23.12■■□□□ 1.29
CPNE7-208ENST00000566398 PICK1Q9NRD5 415 aa23.12■■□□□ 1.29
CPNE7-208ENST00000566398 CCDC85CA6NKD9 419 aa23.11■■□□□ 1.29
CPNE7-208ENST00000566398 TTF1Q15361 905 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-208ENST00000566398 TAF1CQ15572 869 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-208ENST00000566398 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-208ENST00000566398 FAM43AQ8N2R8 423 aa23.11■■□□□ 1.29
CPNE7-208ENST00000566398 MAGEB6Q8N7X4 407 aa23.11■■□□□ 1.29
CPNE7-208ENST00000566398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.11■■□□□ 1.29
CPNE7-208ENST00000566398 LRRCC1Q9C099 1032 aa23.11■■□□□ 1.29
CPNE7-208ENST00000566398 LAMB1P07942 1786 aa23.11■■□□□ 1.29
CPNE7-208ENST00000566398 TBC1D12O60347 775 aa23.1■■□□□ 1.29
CPNE7-208ENST00000566398 CERS3Q8IU89 383 aa23.1■■□□□ 1.29
CPNE7-208ENST00000566398 DNAJC2Q99543 621 aaKnown RBP23.1■■□□□ 1.29
CPNE7-208ENST00000566398 KCNH4Q9UQ05 1017 aa23.1■■□□□ 1.29
CPNE7-208ENST00000566398 FLT1P17948 1338 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 SLURP2P0DP57 97 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 PKN2Q16513 984 aaKnown RBP23.09■■□□□ 1.29
CPNE7-208ENST00000566398 MAPKAPK5Q8IW41 473 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 MIGA1Q8NAN2 632 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 TGFBRAP1Q8WUH2 860 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 DHX36Q9H2U1 1008 aaKnown RBP23.09■■□□□ 1.29
CPNE7-208ENST00000566398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.09■■□□□ 1.29
CPNE7-208ENST00000566398 ZFYVE28Q9HCC9 887 aa23.09■■□□□ 1.29
CPNE7-208ENST00000566398 ZCCHC17Q9NP64 241 aaKnown RBP23.09■■□□□ 1.29
CPNE7-208ENST00000566398 DOCK2Q92608 1830 aa23.08■■□□□ 1.29
CPNE7-208ENST00000566398 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
CPNE7-208ENST00000566398 BTBD19C9JJ37 291 aa23.08■■□□□ 1.29
CPNE7-208ENST00000566398 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
CPNE7-208ENST00000566398 DYNLL1P63167 89 aaKnown RBP23.08■■□□□ 1.29
CPNE7-208ENST00000566398 GOLIM4O00461 696 aa23.07■■□□□ 1.28
CPNE7-208ENST00000566398 PTPRAP18433 802 aa23.07■■□□□ 1.28
CPNE7-208ENST00000566398 PI4KBQ9UBF8 816 aa23.07■■□□□ 1.28
CPNE7-208ENST00000566398 HERC5Q9UII4 1024 aaKnown RBP23.07■■□□□ 1.28
CPNE7-208ENST00000566398 ZHX2Q9Y6X8 837 aa23.07■■□□□ 1.28
CPNE7-208ENST00000566398 CXCL11O14625 94 aa23.06■■□□□ 1.28
CPNE7-208ENST00000566398 ERO1AQ96HE7 468 aa23.06■■□□□ 1.28
CPNE7-208ENST00000566398 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
CPNE7-208ENST00000566398 ATP5JP18859 108 aa23.05■■□□□ 1.28
CPNE7-208ENST00000566398 SP3Q02447 781 aa23.05■■□□□ 1.28
CPNE7-208ENST00000566398 SLC9C2Q5TAH2 1124 aa23.05■■□□□ 1.28
CPNE7-208ENST00000566398 ANKRD23Q86SG2 305 aa23.05■■□□□ 1.28
CPNE7-208ENST00000566398 PDE6AP16499 860 aa23.04■■□□□ 1.28
CPNE7-208ENST00000566398 USP5P45974 858 aa23.04■■□□□ 1.28
CPNE7-208ENST00000566398 TRIM34Q9BYJ4 488 aa23.04■■□□□ 1.28
CPNE7-208ENST00000566398 BOLA2Q9H3K6 86 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms