RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 COL2A1P02458 1487 aaPredicted RBP26.36■■□□□ 1.81
SPG7-214ENST00000566371 BAG3O95817 575 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 ALDH1A1P00352 501 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 PLCG2P16885 1265 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 LRRCC1Q9C099 1032 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 ZNF112Q9UJU3 913 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 SNCAIPQ9Y6H5 919 aa26.35■■□□□ 1.81
SPG7-214ENST00000566371 SPDYE5A6NIY4 337 aa26.34■■□□□ 1.81
SPG7-214ENST00000566371 PPP4CP60510 307 aa26.34■■□□□ 1.81
SPG7-214ENST00000566371 PICALMQ13492 652 aa26.34■■□□□ 1.81
SPG7-214ENST00000566371 CFHR5Q9BXR6 569 aa26.34■■□□□ 1.81
SPG7-214ENST00000566371 IDH1O75874 414 aaKnown RBP26.33■■□□□ 1.81
SPG7-214ENST00000566371 SH3BP5LQ7L8J4 393 aa26.33■■□□□ 1.81
SPG7-214ENST00000566371 ERO1BQ86YB8 467 aa26.33■■□□□ 1.81
SPG7-214ENST00000566371 IFNL1Q8IU54 200 aa26.33■■□□□ 1.81
SPG7-214ENST00000566371 ZSCAN29Q8IWY8 852 aaPredicted RBP26.33■■□□□ 1.81
SPG7-214ENST00000566371 ZKSCAN4Q969J2 545 aaPredicted RBP26.33■■□□□ 1.81
SPG7-214ENST00000566371 DCTPP1Q9H773 170 aa26.33■■□□□ 1.81
SPG7-214ENST00000566371 TESPA1A2RU30 521 aaPredicted RBP26.32■■□□□ 1.8
SPG7-214ENST00000566371 MAP3K10Q02779 954 aa26.32■■□□□ 1.8
SPG7-214ENST00000566371 MAP3K12Q12852 859 aa26.32■■□□□ 1.8
SPG7-214ENST00000566371 TTF1Q15361 905 aaPredicted RBP26.32■■□□□ 1.8
SPG7-214ENST00000566371 ADGRA1Q86SQ6 560 aa26.32■■□□□ 1.8
SPG7-214ENST00000566371 TEX11Q8IYF3 940 aa26.32■■□□□ 1.8
SPG7-214ENST00000566371 AATFQ9NY61 560 aaKnown RBP eCLIP26.32■■□□□ 1.8
SPG7-214ENST00000566371 NDUFB9Q9Y6M9 179 aa26.32■■□□□ 1.8
SPG7-214ENST00000566371 DDTLA6NHG4 134 aaPredicted RBP26.31■■□□□ 1.8
SPG7-214ENST00000566371 NOM1Q5C9Z4 860 aaKnown RBP26.31■■□□□ 1.8
SPG7-214ENST00000566371 CERS3Q8IU89 383 aa26.31■■□□□ 1.8
SPG7-214ENST00000566371 SH3RF3Q8TEJ3 882 aaPredicted RBP26.31■■□□□ 1.8
SPG7-214ENST00000566371 CNKSR2Q8WXI2 1034 aa26.31■■□□□ 1.8
SPG7-214ENST00000566371 OTUD5Q96G74 571 aa26.31■■□□□ 1.8
SPG7-214ENST00000566371 ANTXR1Q9H6X2 564 aa26.31■■□□□ 1.8
SPG7-214ENST00000566371 CASP8AP2Q9UKL3 1982 aa26.31■■□□□ 1.8
SPG7-214ENST00000566371 INPP5BP32019 993 aa26.3■■□□□ 1.8
SPG7-214ENST00000566371 GTF2A2P52657 109 aa26.3■■□□□ 1.8
SPG7-214ENST00000566371 NOL9Q5SY16 702 aaKnown RBP26.3■■□□□ 1.8
SPG7-214ENST00000566371 MS4A4AQ96JQ5 239 aa26.3■■□□□ 1.8
SPG7-214ENST00000566371 OSBPL5Q9H0X9 879 aaPredicted RBP26.3■■□□□ 1.8
SPG7-214ENST00000566371 CYP7A1P22680 504 aa26.29■■□□□ 1.8
SPG7-214ENST00000566371 PPIL2Q13356 520 aa26.29■■□□□ 1.8
SPG7-214ENST00000566371 OTUD7BQ6GQQ9 843 aa26.29■■□□□ 1.8
SPG7-214ENST00000566371 PCDHB15Q9Y5E8 787 aa26.29■■□□□ 1.8
SPG7-214ENST00000566371 FOCADQ5VW36 1801 aa26.29■■□□□ 1.8
SPG7-214ENST00000566371 CDK5RAP2Q96SN8 1893 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 PHF20L1A8MW92 1017 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 IGF2BP3O00425 579 aaKnown RBP eCLIP26.28■■□□□ 1.8
SPG7-214ENST00000566371 TBC1D8O95759 1140 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 ATP5JP18859 108 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 PPATQ06203 517 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 MAGEB6Q8N7X4 407 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 BCL11AQ9H165 835 aa26.28■■□□□ 1.8
SPG7-214ENST00000566371 TBC1D12O60347 775 aa26.27■■□□□ 1.8
SPG7-214ENST00000566371 CRBNQ96SW2 442 aa26.27■■□□□ 1.8
SPG7-214ENST00000566371 DNAJC2Q99543 621 aaKnown RBP26.26■■□□□ 1.79
SPG7-214ENST00000566371 PTPN18Q99952 460 aa26.26■■□□□ 1.79
SPG7-214ENST00000566371 GOLIM4O00461 696 aa26.25■■□□□ 1.79
SPG7-214ENST00000566371 IRF6O14896 467 aa26.25■■□□□ 1.79
SPG7-214ENST00000566371 SMARCA5O60264 1052 aaPredicted RBP26.25■■□□□ 1.79
SPG7-214ENST00000566371 SNAPC2Q13487 334 aa26.25■■□□□ 1.79
SPG7-214ENST00000566371 AAMPQ13685 434 aa26.25■■□□□ 1.79
SPG7-214ENST00000566371 BRI3BPQ8WY22 251 aa26.25■■□□□ 1.79
SPG7-214ENST00000566371 DHX36Q9H2U1 1008 aaKnown RBP26.25■■□□□ 1.79
SPG7-214ENST00000566371 FLT1P17948 1338 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 CCL15-CCL14A0A0B4J2E2 113 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 CETPP11597 493 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 CCL15Q16663 113 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 TGFBRAP1Q8WUH2 860 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 HAUS7Q99871 368 aa26.24■■□□□ 1.79
SPG7-214ENST00000566371 GPR25O00155 361 aa26.23■■□□□ 1.79
SPG7-214ENST00000566371 CTNND1O60716 968 aaKnown RBP26.23■■□□□ 1.79
SPG7-214ENST00000566371 SCYL3Q8IZE3 742 aa26.23■■□□□ 1.79
SPG7-214ENST00000566371 MIGA1Q8NAN2 632 aa26.23■■□□□ 1.79
SPG7-214ENST00000566371 PAG1Q9NWQ8 432 aa26.23■■□□□ 1.79
SPG7-214ENST00000566371 DOCK1Q14185 1865 aa26.23■■□□□ 1.79
SPG7-214ENST00000566371 PDE6AP16499 860 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 DYNLL1P63167 89 aaKnown RBP26.22■■□□□ 1.79
SPG7-214ENST00000566371 SLC9C2Q5TAH2 1124 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 ZNF296Q8WUU4 475 aaPredicted RBP26.22■■□□□ 1.79
SPG7-214ENST00000566371 BOLA2Q9H3K6 86 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 PICK1Q9NRD5 415 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 PI4KBQ9UBF8 816 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 HERC5Q9UII4 1024 aaKnown RBP26.22■■□□□ 1.79
SPG7-214ENST00000566371 KCNH4Q9UQ05 1017 aa26.22■■□□□ 1.79
SPG7-214ENST00000566371 MAPKAPK5Q8IW41 473 aa26.21■■□□□ 1.79
SPG7-214ENST00000566371 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
SPG7-214ENST00000566371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.21■■□□□ 1.791e-18■■■■■ 75.5
SPG7-214ENST00000566371 ZCCHC17Q9NP64 241 aaKnown RBP26.21■■□□□ 1.79
SPG7-214ENST00000566371 ECHDC1Q9NTX5 307 aa26.21■■□□□ 1.79
SPG7-214ENST00000566371 GPATCH3Q96I76 525 aa26.2■■□□□ 1.78
SPG7-214ENST00000566371 SIPA1L1O43166 1804 aa26.2■■□□□ 1.78
SPG7-214ENST00000566371 PTPRAP18433 802 aa26.19■■□□□ 1.78
SPG7-214ENST00000566371 CRHR2Q13324 411 aa26.19■■□□□ 1.78
SPG7-214ENST00000566371 DGKZQ13574 1117 aa26.19■■□□□ 1.78
SPG7-214ENST00000566371 EDC3Q96F86 508 aaKnown RBP26.19■■□□□ 1.78
SPG7-214ENST00000566371 RIOK1Q9BRS2 568 aaKnown RBP26.19■■□□□ 1.78
SPG7-214ENST00000566371 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.19■■□□□ 1.781e-8■■■□□ 15.8
SPG7-214ENST00000566371 MCOLN1Q9GZU1 580 aa26.19■■□□□ 1.78
SPG7-214ENST00000566371 TCRBV5S4A2TA0A5A2 114 aa26.18■■□□□ 1.78
SPG7-214ENST00000566371 FKTNO75072 461 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms