RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
CFDP1-206ENST00000566254 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
CFDP1-206ENST00000566254 KNSTRNQ9Y448 316 aa11.73□□□□□ -0.53
CFDP1-206ENST00000566254 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
CFDP1-206ENST00000566254 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 SPINT1O43278 529 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 RGS20O76081 388 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 NPR3P17342 541 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 GPC1P35052 558 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 NOS2P35228 1153 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
CFDP1-206ENST00000566254 DEFB115Q30KQ5 88 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 COX20Q5RI15 118 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 SH3PXD2AQ5TCZ1 1133 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 PRR5LQ6MZQ0 368 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
CFDP1-206ENST00000566254 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
CFDP1-206ENST00000566254 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.53
CFDP1-206ENST00000566254 RGS19P49795 217 aa11.71□□□□□ -0.53
CFDP1-206ENST00000566254 RNF144AP50876 292 aaPredicted RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 ARHGAP4P98171 946 aa11.71□□□□□ -0.53
CFDP1-206ENST00000566254 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
CFDP1-206ENST00000566254 INSM2Q96T92 566 aaPredicted RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 NIFKQ9BYG3 293 aaKnown RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
CFDP1-206ENST00000566254 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
CFDP1-206ENST00000566254 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
CFDP1-206ENST00000566254 EPHX2P34913 555 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
CFDP1-206ENST00000566254 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 TMEM214Q6NUQ4 689 aaKnown RBP11.7□□□□□ -0.54
CFDP1-206ENST00000566254 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 RHBDD1Q8TEB9 315 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 MYO19Q96H55 970 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 ZNF232Q9UNY5 417 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 MRC1P22897 1456 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
CFDP1-206ENST00000566254 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 TNFRSF10BO14763 440 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 NPHP1O15259 732 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
CFDP1-206ENST00000566254 FAM13AO94988 1023 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
CFDP1-206ENST00000566254 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 SCN4AP35499 1836 aa11.69□□□□□ -0.54
CFDP1-206ENST00000566254 SRGNP10124 158 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
CFDP1-206ENST00000566254 GRM1Q13255 1194 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
CFDP1-206ENST00000566254 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
CFDP1-206ENST00000566254 A0A087WZG4 1122 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 UPP2O95045 317 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 ERCC3P19447 782 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 MPSTP25325 297 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
CFDP1-206ENST00000566254 CCDC93Q567U6 631 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 OLFM4Q6UX06 510 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 CACNA1SQ13698 1873 aa11.67□□□□□ -0.54
CFDP1-206ENST00000566254 STARD3NLO95772 234 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 IL13P35225 146 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 CTSOP43234 321 aaPredicted RBP11.66□□□□□ -0.54
CFDP1-206ENST00000566254 ST5P78524 1137 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 CYP4F22Q6NT55 531 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
CFDP1-206ENST00000566254 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 SETDB2Q96T68 719 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
CFDP1-206ENST00000566254 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
CFDP1-206ENST00000566254 STIM2Q9P246 746 aa11.66□□□□□ -0.54
CFDP1-206ENST00000566254 AVPP01185 164 aa11.65□□□□□ -0.54
CFDP1-206ENST00000566254 RTN1Q16799 776 aa11.65□□□□□ -0.54
CFDP1-206ENST00000566254 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
CFDP1-206ENST00000566254 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
CFDP1-206ENST00000566254 DCTN4Q9UJW0 460 aa11.65□□□□□ -0.54
CFDP1-206ENST00000566254 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 FAM187AA6NFU0 413 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 HMOX1P09601 288 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 BMP2P12643 396 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 CC2D1BQ5T0F9 858 aaKnown RBP11.64□□□□□ -0.55
CFDP1-206ENST00000566254 MRPL14Q6P1L8 145 aaKnown RBP11.64□□□□□ -0.55
CFDP1-206ENST00000566254 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 ZNF428Q96B54 188 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 GPR101Q96P66 508 aaPredicted RBP11.64□□□□□ -0.55
CFDP1-206ENST00000566254 MCOLN1Q9GZU1 580 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
CFDP1-206ENST00000566254 KIF7Q2M1P5 1343 aa11.63□□□□□ -0.55
CFDP1-206ENST00000566254 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms