RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 COL2A1P02458 1487 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-212ENST00000566121 CENPFP49454 3210 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 INPP5BP32019 993 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 TCP10Q12799 353 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 TAF1CQ15572 869 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-212ENST00000566121 GORABQ5T7V8 394 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
CMTM3-212ENST00000566121 ARMC5Q96C12 935 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
CMTM3-212ENST00000566121 BTBD19C9JJ37 291 aa18.67■□□□□ 0.58
CMTM3-212ENST00000566121 CTNND1O60716 968 aaKnown RBP18.67■□□□□ 0.58
CMTM3-212ENST00000566121 PPP4CP60510 307 aa18.67■□□□□ 0.58
CMTM3-212ENST00000566121 SH3BP5LQ7L8J4 393 aa18.67■□□□□ 0.58
CMTM3-212ENST00000566121 RLBP1P12271 317 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 MCAMP43121 646 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 BTDP43251 543 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 PRMT2P55345 433 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 MOGSQ13724 837 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 TNNI3KQ59H18 835 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 SLC45A1Q9Y2W3 748 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 FPGT-TNNI3KV9GXZ4 949 aa18.66■□□□□ 0.58
CMTM3-212ENST00000566121 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
CMTM3-212ENST00000566121 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
CMTM3-212ENST00000566121 CD99L2Q8TCZ2 262 aa18.65■□□□□ 0.58
CMTM3-212ENST00000566121 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.57
CMTM3-212ENST00000566121 FASTKD5Q7L8L6 764 aaKnown RBP18.64■□□□□ 0.57
CMTM3-212ENST00000566121 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
CMTM3-212ENST00000566121 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
CMTM3-212ENST00000566121 DDTLA6NHG4 134 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-212ENST00000566121 PLCG2P16885 1265 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 SOX10P56693 466 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
CMTM3-212ENST00000566121 CERS3Q8IU89 383 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
CMTM3-212ENST00000566121 A0A0G2JLL6 359 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 BAG3O95817 575 aa18.62■□□□□ 0.57
CMTM3-212ENST00000566121 PTPRAP18433 802 aa18.62■□□□□ 0.57
CMTM3-212ENST00000566121 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 HSP90AB4PQ58FF6 505 aa18.62■□□□□ 0.57
CMTM3-212ENST00000566121 CEP85Q6P2H3 762 aa18.62■□□□□ 0.57
CMTM3-212ENST00000566121 PRRT2Q7Z6L0 340 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 DHX36Q9H2U1 1008 aaKnown RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-212ENST00000566121 ADGRA2Q96PE1 1338 aa18.62■□□□□ 0.57
CMTM3-212ENST00000566121 CAP1Q01518 475 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 KIF22Q14807 665 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 GPAT2Q6NUI2 795 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 PI16Q6UXB8 463 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-212ENST00000566121 DBNDD2Q9BQY9 259 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
CMTM3-212ENST00000566121 PICK1Q9NRD5 415 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 GINM1Q9NU53 330 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 RAI14Q9P0K7 980 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 LRP2BPQ9P2M1 347 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
CMTM3-212ENST00000566121 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
CMTM3-212ENST00000566121 PDHXO00330 501 aa18.6■□□□□ 0.57
CMTM3-212ENST00000566121 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-212ENST00000566121 TTC39AQ5SRH9 613 aa18.6■□□□□ 0.57
CMTM3-212ENST00000566121 NBPF11Q86T75 865 aa18.6■□□□□ 0.57
CMTM3-212ENST00000566121 ZSCAN29Q8IWY8 852 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-212ENST00000566121 RPAP2Q8IXW5 612 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-212ENST00000566121 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
CMTM3-212ENST00000566121 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
CMTM3-212ENST00000566121 BRCA2P51587 3418 aa18.6■□□□□ 0.57
CMTM3-212ENST00000566121 MKI67P46013 3256 aaKnown RBP18.59■□□□□ 0.57
CMTM3-212ENST00000566121 OS9Q13438 667 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-212ENST00000566121 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-212ENST00000566121 PARK7Q99497 189 aaKnown RBP18.59■□□□□ 0.57
CMTM3-212ENST00000566121 PI4KBQ9UBF8 816 aa18.59■□□□□ 0.57
CMTM3-212ENST00000566121 BCRP11274 1271 aa18.58■□□□□ 0.56
CMTM3-212ENST00000566121 NAA16Q6N069 864 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-212ENST00000566121 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-212ENST00000566121 ZNF333Q96JL9 665 aa18.58■□□□□ 0.56
CMTM3-212ENST00000566121 NOL10Q9BSC4 688 aaKnown RBP18.58■□□□□ 0.56
CMTM3-212ENST00000566121 DOCK2Q92608 1830 aa18.58■□□□□ 0.56
CMTM3-212ENST00000566121 HOXD10P28358 340 aa18.57■□□□□ 0.56
CMTM3-212ENST00000566121 TEX11Q8IYF3 940 aa18.57■□□□□ 0.56
CMTM3-212ENST00000566121 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
CMTM3-212ENST00000566121 DDX19BQ9UMR2 479 aa18.57■□□□□ 0.56
CMTM3-212ENST00000566121 CAPN2P17655 700 aa18.56■□□□□ 0.56
CMTM3-212ENST00000566121 PICALMQ13492 652 aa18.56■□□□□ 0.56
CMTM3-212ENST00000566121 PROCA1Q8NCQ7 364 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-212ENST00000566121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.56■□□□□ 0.56
CMTM3-212ENST00000566121 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
CMTM3-212ENST00000566121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
CMTM3-212ENST00000566121 CAP2P40123 477 aa18.55■□□□□ 0.56
CMTM3-212ENST00000566121 SH3D19Q5HYK7 790 aa18.55■□□□□ 0.56
CMTM3-212ENST00000566121 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
CMTM3-212ENST00000566121 WDR18Q9BV38 432 aa18.55■□□□□ 0.56
CMTM3-212ENST00000566121 SRRDQ9UH36 339 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms