RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EBAG9O00559 213 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 STAT6P42226 847 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 CCZ1BP86790 482 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 CCZ1P86791 482 aaPredicted RBP11.93□□□□□ -0.5
USB1-212ENST00000566082 LONRF2Q1L5Z9 754 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 DHX40Q8IX18 779 aaKnown RBP11.93□□□□□ -0.5
USB1-212ENST00000566082 MAGEB6Q8N7X4 407 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 PARD6BQ9BYG5 372 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 KRT86O43790 486 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 IDEP14735 1019 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 SLC39A14Q15043 492 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 SOGA3Q5TF21 947 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 TAF4BQ92750 862 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 ADGRB2O60241 1585 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 MAST3O60307 1309 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 ZEB2O60315 1214 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 MBD4O95243 580 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 PTPN12Q05209 780 aaKnown RBP11.93□□□□□ -0.5
USB1-212ENST00000566082 E4F1Q66K89 784 aaPredicted RBP11.93□□□□□ -0.5
USB1-212ENST00000566082 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 SLC52A2Q9HAB3 445 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 PHLPP2Q6ZVD8 1323 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
USB1-212ENST00000566082 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
USB1-212ENST00000566082 MACROD2A1Z1Q3 448 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 ARMCX5Q6P1M9 558 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 FMR1NBQ8N0W7 255 aaPredicted RBP11.92□□□□□ -0.5
USB1-212ENST00000566082 RABGGTAQ92696 567 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 HINFPQ9BQA5 517 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 MYO1BO43795 1136 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 STX10O60499 249 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 MCM7P33993 719 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 KIF5AQ12840 1032 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 BRD3Q15059 726 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 ZMYM1Q5SVZ6 1142 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 IFIT1BQ5T764 474 aaKnown RBP11.92□□□□□ -0.5
USB1-212ENST00000566082 GRAMD1CQ8IYS0 662 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 AFAP1L1Q8TED9 768 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 ESR2Q92731 530 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 TTF2Q9UNY4 1162 aaKnown RBP11.92□□□□□ -0.5
USB1-212ENST00000566082 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 IKBKBO14920 756 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 COBLO75128 1261 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 UQCRFS1P1P0C7P4 283 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
USB1-212ENST00000566082 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 TMTC2Q8N394 836 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 IQUBQ8NA54 791 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 TMEM87BQ96K49 555 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
USB1-212ENST00000566082 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
USB1-212ENST00000566082 CYP7A1P22680 504 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 TUBB4BP68371 445 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 ALS2CR12Q96Q35 445 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 RMND1Q9NWS8 449 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 CAMSAP1Q5T5Y3 1602 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 PSMA7O14818 248 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 TUBBP07437 444 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
USB1-212ENST00000566082 PPARDQ03181 441 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 CCDC42Q96M95 316 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
USB1-212ENST00000566082 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 HSF2BPO75031 334 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 KRT83P78385 493 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 FAM76AQ8TAV0 307 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
USB1-212ENST00000566082 ARMT1Q9H993 441 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
USB1-212ENST00000566082 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 TTLL7Q6ZT98 887 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 OSBP2Q969R2 916 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 PSMB7Q99436 277 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 TCP11L1Q9NUJ3 509 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 TSPY2A6NKD2 308 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 M0R2C6 588 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 ATP2C2O75185 946 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 BMP15O95972 392 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 KRT2P35908 639 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 TMTC1Q8IUR5 882 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 ANKRD65E5RJM6 399 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms