RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 DPF3Q92784 378 aa7.99□□□□□ -1.13
UBFD1-204ENST00000565634 DBNDD1Q9H9R9 158 aa7.99□□□□□ -1.13
UBFD1-204ENST00000565634 RBBP6Q7Z6E9 1792 aaKnown RBP7.99□□□□□ -1.13
UBFD1-204ENST00000565634 PDIA4P13667 645 aaKnown RBP7.98□□□□□ -1.13
UBFD1-204ENST00000565634 HNRNPUQ00839 825 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBFD1-204ENST00000565634 NR5A1Q13285 461 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 TNIP1Q15025 636 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 AGERQ15109 404 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 KRT24Q2M2I5 525 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 SUSD4Q5VX71 490 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 Q7L0L9 218 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 CD99L2Q8TCZ2 262 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 RBM17Q96I25 401 aaKnown RBP7.98□□□□□ -1.13
UBFD1-204ENST00000565634 GGA3Q9NZ52 723 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 ZNF521Q96K83 1311 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 HTTP42858 3142 aa7.98□□□□□ -1.13
UBFD1-204ENST00000565634 TM4SF4P48230 202 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 SLC4A8Q2Y0W8 1093 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 CRY2Q49AN0 593 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 SH3D19Q5HYK7 790 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
UBFD1-204ENST00000565634 CLEC4GQ6UXB4 293 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
UBFD1-204ENST00000565634 BPHLQ86WA6 291 aaPredicted RBP7.97□□□□□ -1.13
UBFD1-204ENST00000565634 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 GAS2L2Q8NHY3 880 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 FMNL2Q96PY5 1086 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 TEX13AQ9BXU3 409 aaPredicted RBP7.97□□□□□ -1.13
UBFD1-204ENST00000565634 PTPN22Q9Y2R2 807 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
UBFD1-204ENST00000565634 MRC1P22897 1456 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 MAPK8IP3Q9UPT6 1336 aa7.97□□□□□ -1.13
UBFD1-204ENST00000565634 ZSWIM8A7E2V4 1837 aa7.96□□□□□ -1.13
UBFD1-204ENST00000565634 ZNF853P0CG23 659 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
UBFD1-204ENST00000565634 TEFQ10587 303 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 KIF4BQ2VIQ3 1234 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
UBFD1-204ENST00000565634 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 TSR2Q969E8 191 aaKnown RBP7.96□□□□□ -1.14
UBFD1-204ENST00000565634 CRAMP1Q96RY5 1269 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 SIPA1L3O60292 1781 aaPredicted RBP7.96□□□□□ -1.14
UBFD1-204ENST00000565634 LAMB2P55268 1798 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 RANBP2P49792 3224 aaKnown RBP7.96□□□□□ -1.14
UBFD1-204ENST00000565634 CEMIPQ8WUJ3 1361 aa7.96□□□□□ -1.14
UBFD1-204ENST00000565634 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
UBFD1-204ENST00000565634 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
UBFD1-204ENST00000565634 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
UBFD1-204ENST00000565634 TTLL7Q6ZT98 887 aa7.95□□□□□ -1.14
UBFD1-204ENST00000565634 SH3BP5LQ7L8J4 393 aa7.95□□□□□ -1.14
UBFD1-204ENST00000565634 PROCA1Q8NCQ7 364 aaPredicted RBP7.95□□□□□ -1.14
UBFD1-204ENST00000565634 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
UBFD1-204ENST00000565634 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 ELL2O00472 640 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-204ENST00000565634 CHL1O00533 1208 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 HTATSF1O43719 755 aaKnown RBP7.94□□□□□ -1.14
UBFD1-204ENST00000565634 SLFN5Q08AF3 891 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-204ENST00000565634 TRMT2AQ8IZ69 625 aaKnown RBP7.94□□□□□ -1.14
UBFD1-204ENST00000565634 TSPYL6Q8N831 410 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 C8orf58Q8NAV2 365 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 TMX4Q9H1E5 349 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-204ENST00000565634 MBIPQ9NS73 344 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 ABCC4O15439 1325 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 UBN2Q6ZU65 1347 aa7.94□□□□□ -1.14
UBFD1-204ENST00000565634 UNC80Q8N2C7 3258 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 VSIG8P0DPA2 414 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-204ENST00000565634 CCDC27Q2M243 656 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 SUPT20HQ8NEM7 779 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 SH3TC2Q8TF17 1288 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
UBFD1-204ENST00000565634 DPF2Q92785 391 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 RTFDC1Q9BY42 306 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-204ENST00000565634 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 STAP2Q9UGK3 403 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 RTL9Q8NET4 1388 aa7.93□□□□□ -1.14
UBFD1-204ENST00000565634 MAN1A2O60476 641 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 NEFMP07197 916 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 MYL6BP14649 208 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 WDR63Q8IWG1 891 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 SP8Q8IXZ3 490 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 TRMT44Q8IYL2 757 aaKnown RBP7.92□□□□□ -1.14
UBFD1-204ENST00000565634 MEIOBQ8N635 442 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 NLRP3Q96P20 1036 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 NYXQ9GZU5 481 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 EFCC1Q9HA90 598 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
UBFD1-204ENST00000565634 PTCH2Q9Y6C5 1203 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 KDM3BQ7LBC6 1761 aa7.92□□□□□ -1.14
UBFD1-204ENST00000565634 IGF2BP3O00425 579 aaKnown RBP eCLIP7.91□□□□□ -1.14
UBFD1-204ENST00000565634 ECE2O60344 883 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 BMP2P12643 396 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 FSHRP23945 695 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms