RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
SPG7-211ENST00000565370 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.99□□□□□ -0.01
SPG7-211ENST00000565370 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
SPG7-211ENST00000565370 SIRT2Q8IXJ6 389 aa14.99□□□□□ -0.01
SPG7-211ENST00000565370 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
SPG7-211ENST00000565370 SPDYE5A6NIY4 337 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
SPG7-211ENST00000565370 IDH1O75874 414 aaKnown RBP14.98□□□□□ -0.01
SPG7-211ENST00000565370 MAP3K12Q12852 859 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
SPG7-211ENST00000565370 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 ZNF384Q8TF68 577 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 LRRCC1Q9C099 1032 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 BCL11AQ9H165 835 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 ATRNL1Q5VV63 1379 aa14.98□□□□□ -0.01
SPG7-211ENST00000565370 DOCK1Q14185 1865 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 FOCADQ5VW36 1801 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
SPG7-211ENST00000565370 GTF2A2P52657 109 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 RHBDL3P58872 404 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 MIGA2Q7L4E1 593 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 CFHR5Q9BXR6 569 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 PCDH10Q9P2E7 1040 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
SPG7-211ENST00000565370 MYO5AQ9Y4I1 1855 aaKnown RBP14.97□□□□□ -0.01
SPG7-211ENST00000565370 GJA5P36382 358 aa14.96□□□□□ -0.01
SPG7-211ENST00000565370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.96□□□□□ -0.01
SPG7-211ENST00000565370 ZKSCAN4Q969J2 545 aaPredicted RBP14.96□□□□□ -0.01
SPG7-211ENST00000565370 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
SPG7-211ENST00000565370 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
SPG7-211ENST00000565370 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
SPG7-211ENST00000565370 PIH1D3Q9NQM4 214 aaKnown RBP14.96□□□□□ -0.01
SPG7-211ENST00000565370 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
SPG7-211ENST00000565370 TNRC18O15417 2968 aaPredicted RBP14.95□□□□□ -0.02
SPG7-211ENST00000565370 TBC1D8O95759 1140 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 CYP7A1P22680 504 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 PPIL2Q13356 520 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 SNAPC2Q13487 334 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 DGKZQ13574 1117 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 NOM1Q5C9Z4 860 aaKnown RBP14.95□□□□□ -0.02
SPG7-211ENST00000565370 NOL9Q5SY16 702 aaKnown RBP14.95□□□□□ -0.02
SPG7-211ENST00000565370 PICK1Q9NRD5 415 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 CDK5RAP2Q96SN8 1893 aa14.95□□□□□ -0.02
SPG7-211ENST00000565370 CCL15-CCL14A0A0B4J2E2 113 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 IGF2BP3O00425 579 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPG7-211ENST00000565370 CETPP11597 493 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 INPP5BP32019 993 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 PPATQ06203 517 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 CCL15Q16663 113 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 ZFPM1Q8IX07 1006 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 SH3RF3Q8TEJ3 882 aaPredicted RBP14.94□□□□□ -0.02
SPG7-211ENST00000565370 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 DNAJC2Q99543 621 aaKnown RBP14.94□□□□□ -0.02
SPG7-211ENST00000565370 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 ZNF112Q9UJU3 913 aa14.94□□□□□ -0.02
SPG7-211ENST00000565370 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
SPG7-211ENST00000565370 DDTLA6NHG4 134 aaPredicted RBP14.93□□□□□ -0.02
SPG7-211ENST00000565370 PPP4CP60510 307 aa14.93□□□□□ -0.02
SPG7-211ENST00000565370 CTU1Q7Z7A3 348 aaKnown RBP14.93□□□□□ -0.02
SPG7-211ENST00000565370 SCYL3Q8IZE3 742 aa14.93□□□□□ -0.02
SPG7-211ENST00000565370 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
SPG7-211ENST00000565370 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
SPG7-211ENST00000565370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
SPG7-211ENST00000565370 FLT1P17948 1338 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 GPR25O00155 361 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 GOLIM4O00461 696 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 IRF6O14896 467 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 FKTNO75072 461 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 ADGRA1Q86SQ6 560 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 ZNF296Q8WUU4 475 aaPredicted RBP14.92□□□□□ -0.02
SPG7-211ENST00000565370 ANTXR1Q9H6X2 564 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
SPG7-211ENST00000565370 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
SPG7-211ENST00000565370 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 NAV1Q8NEY1 1877 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
SPG7-211ENST00000565370 PDE4DIPQ5VU43 2346 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 TBC1D12O60347 775 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 CTNND1O60716 968 aaKnown RBP14.91□□□□□ -0.02
SPG7-211ENST00000565370 ATP5JP18859 108 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 TAF1CQ15572 869 aaPredicted RBP14.91□□□□□ -0.02
SPG7-211ENST00000565370 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 TGFBRAP1Q8WUH2 860 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■■□□ 17.3
SPG7-211ENST00000565370 PAG1Q9NWQ8 432 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
SPG7-211ENST00000565370 MYH7P12883 1935 aa14.91□□□□□ -0.02
SPG7-211ENST00000565370 USP5P45974 858 aa14.9□□□□□ -0.02
SPG7-211ENST00000565370 CRHR2Q13324 411 aa14.9□□□□□ -0.02
SPG7-211ENST00000565370 AAMPQ13685 434 aa14.9□□□□□ -0.02
SPG7-211ENST00000565370 CRACR2BQ8N4Y2 399 aaPredicted RBP14.9□□□□□ -0.02
SPG7-211ENST00000565370 CRBNQ96SW2 442 aa14.9□□□□□ -0.02
SPG7-211ENST00000565370 BOLA2Q9H3K6 86 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms