RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 SEMA3EO15041 775 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 LDHBP07195 334 aaKnown RBP23.3■■□□□ 1.32
NME3-207ENST00000564628 PRDX5P30044 214 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 TFCP2Q12800 502 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 NFIAQ12857 509 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 SRRDQ9UH36 339 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 CPA4Q9UI42 421 aa23.3■■□□□ 1.32
NME3-207ENST00000564628 HOXD10P28358 340 aa23.29■■□□□ 1.32
NME3-207ENST00000564628 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
NME3-207ENST00000564628 MOGSQ13724 837 aa23.29■■□□□ 1.32
NME3-207ENST00000564628 FAM198AQ9UFP1 575 aa23.29■■□□□ 1.32
NME3-207ENST00000564628 CXCL11O14625 94 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 MYCP01106 439 aaPredicted RBP23.28■■□□□ 1.32
NME3-207ENST00000564628 CTGFP29279 349 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 PSMC4P43686 418 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 TRIM47Q96LD4 638 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 USP40Q9NVE5 1235 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 DENND2AQ9ULE3 1009 aa23.28■■□□□ 1.32
NME3-207ENST00000564628 RPAP2Q8IXW5 612 aaPredicted RBP23.27■■□□□ 1.32
NME3-207ENST00000564628 AKAP2Q9Y2D5 859 aa23.27■■□□□ 1.32
NME3-207ENST00000564628 A0A1B0GUL7 405 aa23.26■■□□□ 1.31
NME3-207ENST00000564628 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
NME3-207ENST00000564628 OSBPP22059 807 aa23.26■■□□□ 1.31
NME3-207ENST00000564628 ADORA1P30542 326 aa23.26■■□□□ 1.31
NME3-207ENST00000564628 FXR1P51114 621 aaKnown RBP eCLIP23.26■■□□□ 1.31
NME3-207ENST00000564628 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
NME3-207ENST00000564628 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
NME3-207ENST00000564628 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
NME3-207ENST00000564628 AK9Q5TCS8 1911 aa23.25■■□□□ 1.31
NME3-207ENST00000564628 FMNL1O95466 1100 aaPredicted RBP23.25■■□□□ 1.31
NME3-207ENST00000564628 TIMM10P62072 90 aa23.25■■□□□ 1.31
NME3-207ENST00000564628 ZGPATQ8N5A5 531 aaKnown RBP23.25■■□□□ 1.31
NME3-207ENST00000564628 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
NME3-207ENST00000564628 GPR108Q9NPR9 543 aa23.25■■□□□ 1.31
NME3-207ENST00000564628 COLQQ9Y215 455 aaPredicted RBP23.25■■□□□ 1.31
NME3-207ENST00000564628 PHF20L1A8MW92 1017 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 ENTPD3O75355 529 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 GRK4P32298 578 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 GPAT2Q6NUI2 795 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 RAET1EQ8TD07 263 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 MYPNQ86TC9 1320 aa23.24■■□□□ 1.31
NME3-207ENST00000564628 BCRP11274 1271 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 PHKA1P46020 1223 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 MTFR1Q15390 333 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
NME3-207ENST00000564628 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 SCYL3Q8IZE3 742 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 SHISA4Q96DD7 197 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 XAGE2Q96GT9 111 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 DOCK2Q92608 1830 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 GAKO14976 1311 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
NME3-207ENST00000564628 RFX7Q2KHR2 1363 aa23.23■■□□□ 1.31
NME3-207ENST00000564628 H0YGN5 161 aa23.22■■□□□ 1.31
NME3-207ENST00000564628 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
NME3-207ENST00000564628 RGS3P49796 1198 aa23.22■■□□□ 1.31
NME3-207ENST00000564628 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
NME3-207ENST00000564628 CCDC102BQ68D86 513 aa23.22■■□□□ 1.31
NME3-207ENST00000564628 A0A0G2JLL6 359 aaPredicted RBP23.21■■□□□ 1.31
NME3-207ENST00000564628 HMMRO75330 724 aa23.21■■□□□ 1.31
NME3-207ENST00000564628 FCGRTP55899 365 aa23.21■■□□□ 1.31
NME3-207ENST00000564628 OS9Q13438 667 aaPredicted RBP23.21■■□□□ 1.31
NME3-207ENST00000564628 PRRT2Q7Z6L0 340 aaPredicted RBP23.21■■□□□ 1.31
NME3-207ENST00000564628 PICK1Q9NRD5 415 aa23.21■■□□□ 1.31
NME3-207ENST00000564628 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
NME3-207ENST00000564628 ZHX2Q9Y6X8 837 aa23.21■■□□□ 1.31
NME3-207ENST00000564628 GJB1P08034 283 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 CYP2C8P10632 490 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 GJA8P48165 433 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 FAM163AQ96GL9 167 aaPredicted RBP23.2■■□□□ 1.3
NME3-207ENST00000564628 EXOC6BQ9Y2D4 811 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
NME3-207ENST00000564628 CCL5P13501 91 aa23.19■■□□□ 1.3
NME3-207ENST00000564628 PTPRAP18433 802 aa23.19■■□□□ 1.3
NME3-207ENST00000564628 UBXN2AP68543 259 aa23.19■■□□□ 1.3
NME3-207ENST00000564628 PRKCZQ05513 592 aa23.19■■□□□ 1.3
NME3-207ENST00000564628 DZIP1Q86YF9 867 aaKnown RBP23.19■■□□□ 1.3
NME3-207ENST00000564628 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
NME3-207ENST00000564628 CEP290O15078 2479 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 RASGRF1Q13972 1273 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 SH3BP5LQ7L8J4 393 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 UBE2Q1Q7Z7E8 422 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 ERC1Q8IUD2 1116 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 SLAIN1Q8ND83 568 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 NEUROD6Q96NK8 337 aa23.18■■□□□ 1.3
NME3-207ENST00000564628 MGAMO43451 1857 aa23.17■■□□□ 1.3
NME3-207ENST00000564628 CTNND1O60716 968 aaKnown RBP23.17■■□□□ 1.3
NME3-207ENST00000564628 HSP90AB4PQ58FF6 505 aa23.17■■□□□ 1.3
NME3-207ENST00000564628 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
NME3-207ENST00000564628 ZSCAN29Q8IWY8 852 aaPredicted RBP23.17■■□□□ 1.3
NME3-207ENST00000564628 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
NME3-207ENST00000564628 ARID4AP29374 1257 aaPredicted RBP23.16■■□□□ 1.3
NME3-207ENST00000564628 BIN2Q9UBW5 565 aaPredicted RBP23.16■■□□□ 1.3
NME3-207ENST00000564628 ABCF2Q9UG63 623 aa23.16■■□□□ 1.3
NME3-207ENST00000564628 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
NME3-207ENST00000564628 DDTLA6NHG4 134 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms