RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 SMARCA2P51531 1590 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 RPS26P62854 115 aaKnown RBP7.31□□□□□ -1.24
CHD9-210ENST00000564582 ZNF252P-AS1Q0IIN9 211 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 KIF4BQ2VIQ3 1234 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 DYMQ7RTS9 669 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 CLEC10AQ8IUN9 316 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 STK35Q8TDR2 534 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 USP31Q70CQ4 1352 aa7.31□□□□□ -1.24
CHD9-210ENST00000564582 SETD5Q9C0A6 1442 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 TCERG1O14776 1098 aaKnown RBP7.3□□□□□ -1.24
CHD9-210ENST00000564582 CTSHP09668 335 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 ID3Q02535 119 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 DDX10Q13206 875 aaKnown RBP7.3□□□□□ -1.24
CHD9-210ENST00000564582 BEND4Q6ZU67 534 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 SLC51AQ86UW1 340 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 C2CD4AQ8NCU7 369 aaPredicted RBP7.3□□□□□ -1.24
CHD9-210ENST00000564582 ATXN3LQ9H3M9 355 aa7.3□□□□□ -1.24
CHD9-210ENST00000564582 ZBED9Q6R2W3 1325 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.29□□□□□ -1.24
CHD9-210ENST00000564582 ZNF862O60290 1169 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 ADAM23O75077 832 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 FAM43AQ8N2R8 423 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 PIDD1Q9HB75 910 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 ACTL7BQ9Y614 415 aa7.29□□□□□ -1.24
CHD9-210ENST00000564582 TMPRSS2O15393 492 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 MAP4P27816 1152 aaKnown RBP7.28□□□□□ -1.24
CHD9-210ENST00000564582 ASPAP45381 313 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 LIG3P49916 1009 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 PWP1Q13610 501 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
CHD9-210ENST00000564582 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
CHD9-210ENST00000564582 FAM83CQ9BQN1 747 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 CRIM1Q9NZV1 1036 aa7.28□□□□□ -1.24
CHD9-210ENST00000564582 FAM95CA0A1B0GW59 222 aa7.27□□□□□ -1.25
CHD9-210ENST00000564582 MAP7Q14244 749 aa7.27□□□□□ -1.25
CHD9-210ENST00000564582 MAP3K11Q16584 847 aa7.27□□□□□ -1.25
CHD9-210ENST00000564582 GRIN3AQ8TCU5 1115 aa7.27□□□□□ -1.25
CHD9-210ENST00000564582 PCDHA4Q9UN74 947 aa7.27□□□□□ -1.25
CHD9-210ENST00000564582 FSTP19883 344 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 RAB6AP20340 208 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 NFKBIBQ15653 356 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 PRSS36Q5K4E3 855 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 AGMOQ6ZNB7 445 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 RGS22Q8NE09 1264 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 GIMAP7Q8NHV1 300 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 FBLIM1Q8WUP2 373 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 FANCD2OSQ96PS1 177 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 MIR1-1HGQ9H1L0 117 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 GSX1Q9H4S2 264 aaPredicted RBP7.26□□□□□ -1.25
CHD9-210ENST00000564582 C7orf69Q9H7B7 122 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 PICK1Q9NRD5 415 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 CACNA2D2Q9NY47 1150 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 PPP1R9AQ9ULJ8 1098 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 PCDHGC5Q9Y5F6 944 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 FHAD1B1AJZ9 1412 aa7.26□□□□□ -1.25
CHD9-210ENST00000564582 WIZO95785 1651 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 CECR2Q9BXF3 1484 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 HMX2A2RU54 273 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 IGLV1-40P01703 118 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 ERVK-24P63145 666 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 ZC3H12AQ5D1E8 599 aaKnown RBP7.25□□□□□ -1.25
CHD9-210ENST00000564582 TRIM42Q8IWZ5 723 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 EZH1Q92800 747 aaPredicted RBP7.25□□□□□ -1.25
CHD9-210ENST00000564582 ELMO3Q96BJ8 720 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 PKNOX2Q96KN3 472 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 DBNDD2Q9BQY9 259 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 ACSS3Q9H6R3 686 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 FAM105AQ9NUU6 356 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 PODXL2Q9NZ53 605 aa7.25□□□□□ -1.25
CHD9-210ENST00000564582 NEFMP07197 916 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 NFIAQ12857 509 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 HS2ST1Q7LGA3 356 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 TMEM87AQ8NBN3 555 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 RSRP1Q9BUV0 290 aa7.24□□□□□ -1.25
CHD9-210ENST00000564582 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 RAB3GAP2Q9H2M9 1393 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
CHD9-210ENST00000564582 L1TD1Q5T7N2 865 aaKnown RBP7.23□□□□□ -1.25
CHD9-210ENST00000564582 MPRIPQ6WCQ1 1025 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 HDXQ7Z353 690 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 SEMA6CQ9H3T2 930 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 SSU72Q9NP77 194 aaKnown RBP7.23□□□□□ -1.25
CHD9-210ENST00000564582 DISC1Q9NRI5 854 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 DAGLAQ9Y4D2 1042 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 ARID4BQ4LE39 1312 aaPredicted RBP7.23□□□□□ -1.25
CHD9-210ENST00000564582 RNF123Q5XPI4 1314 aa7.23□□□□□ -1.25
CHD9-210ENST00000564582 SMG6Q86US8 1419 aaKnown RBP7.22□□□□□ -1.25
CHD9-210ENST00000564582 RNGTTO60942 597 aaKnown RBP7.22□□□□□ -1.25
CHD9-210ENST00000564582 NFICP08651 508 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms