RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 FOCADQ5VW36 1801 aa13.93□□□□□ -0.18
HERC1-214ENST00000561400 SGSM2O43147 1006 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 GPAA1O43292 621 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 CDC42EP5Q6NZY7 148 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 AIDAQ96BJ3 306 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 STRBPQ96SI9 672 aaKnown RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 PLCD4Q9BRC7 762 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 ESYT1Q9BSJ8 1104 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 BAG3O95817 575 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 MCCP23508 829 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 EPHX2P34913 555 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
HERC1-214ENST00000561400 BAZ2AQ9UIF9 1905 aaKnown RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
HERC1-214ENST00000561400 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 NOL10Q9BSC4 688 aaKnown RBP13.91□□□□□ -0.18
HERC1-214ENST00000561400 TAF1DQ9H5J8 278 aaPredicted RBP13.91□□□□□ -0.18
HERC1-214ENST00000561400 RRAGCQ9HB90 399 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 CLRN2A0PK11 232 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 PRKAB2O43741 272 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 CACNB3P54284 484 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 CASC1Q6TDU7 716 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 NMRK2Q9NPI5 230 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 CCDC171Q6TFL3 1326 aa13.91□□□□□ -0.18
HERC1-214ENST00000561400 FOXP2O15409 715 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 RAD50Q92878 1312 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
HERC1-214ENST00000561400 VEGFAP15692 232 aaPredicted RBP13.9□□□□□ -0.18
HERC1-214ENST00000561400 PLCG2P16885 1265 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
HERC1-214ENST00000561400 ZNF70Q9UC06 446 aaPredicted RBP13.9□□□□□ -0.18
HERC1-214ENST00000561400 MYH1P12882 1939 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 DMTNQ08495 405 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 NFIAQ12857 509 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 SCAF8Q9UPN6 1271 aaKnown RBP13.89□□□□□ -0.19
HERC1-214ENST00000561400 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
HERC1-214ENST00000561400 GSG1L2A8MUP6 293 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 PSEN1P49768 467 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 USP50Q70EL3 339 aaPredicted RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 NAV1Q8NEY1 1877 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 MYO1BO43795 1136 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 SEC24BO95487 1268 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 PTH1RQ03431 593 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 AXDND1Q5T1B0 1012 aaPredicted RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 FAM198AQ9UFP1 575 aa13.88□□□□□ -0.19
HERC1-214ENST00000561400 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
HERC1-214ENST00000561400 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 ANGEL2Q5VTE6 544 aaKnown RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 IDI2Q9BXS1 227 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 VEZTQ9HBM0 779 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 EPB41L4AQ9HCS5 686 aaPredicted RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 GGA3Q9NZ52 723 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 DDX60LQ5H9U9 1706 aaKnown RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 TCP10L2B9ZVM9 353 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 GNAT2P19087 354 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 PICALMQ13492 652 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 PNMA8AQ86V59 439 aaPredicted RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 ZFPM1Q8IX07 1006 aa13.87□□□□□ -0.19
HERC1-214ENST00000561400 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
HERC1-214ENST00000561400 FLT1P17948 1338 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 APPP05067 770 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 USP5P45974 858 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 TCP10Q12799 353 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 IFNL3Q8IZI9 196 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
HERC1-214ENST00000561400 ANO2Q9NQ90 1003 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 CNTNAP1P78357 1384 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 FKBP1CQ5VVH2 108 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 TMOD2Q9NZR1 351 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 PGAP2Q9UHJ9 254 aa13.86□□□□□ -0.19
HERC1-214ENST00000561400 YY1P25490 414 aa13.85□□□□□ -0.19
HERC1-214ENST00000561400 DSCC1Q9BVC3 393 aa13.85□□□□□ -0.19
HERC1-214ENST00000561400 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 FGAP02671 866 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 KIAA1211Q6ZU35 1233 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms