RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 PDE6AP16499 860 aa14.69□□□□□ -0.06
USP8-212ENST00000560730 SLFNL1Q499Z3 407 aa14.69□□□□□ -0.06
USP8-212ENST00000560730 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.69□□□□□ -0.06
USP8-212ENST00000560730 MIGA1Q8NAN2 632 aa14.69□□□□□ -0.06
USP8-212ENST00000560730 GCC1Q96CN9 775 aa14.69□□□□□ -0.06
USP8-212ENST00000560730 SLC10A4Q96EP9 437 aa14.69□□□□□ -0.06
USP8-212ENST00000560730 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
USP8-212ENST00000560730 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
USP8-212ENST00000560730 IGSF3O75054 1194 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 CHGBP05060 677 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 MAP2K1Q02750 393 aaPredicted RBP14.68□□□□□ -0.06
USP8-212ENST00000560730 SLC9C2Q5TAH2 1124 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 ANKRD13AQ8IZ07 590 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP8-212ENST00000560730 CSRNP1Q96S65 589 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 ATRNL1Q5VV63 1379 aa14.68□□□□□ -0.06
USP8-212ENST00000560730 TCRBV5S4A2TA0A5A2 114 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
USP8-212ENST00000560730 BAG3O95817 575 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
USP8-212ENST00000560730 GJA5P36382 358 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 MAP3K9P80192 1104 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 SPRYD7Q5W111 196 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
USP8-212ENST00000560730 SMC5Q8IY18 1101 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 TGFBRAP1Q8WUH2 860 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
USP8-212ENST00000560730 ELP3Q9H9T3 547 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 SALL3Q9BXA9 1300 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 MYH1P12882 1939 aa14.67□□□□□ -0.06
USP8-212ENST00000560730 UNCXA6NJT0 531 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 PLCG2P16885 1265 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 INPP5BP32019 993 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 VGLL4Q14135 290 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 DCAF15Q66K64 600 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 B4GALNT3Q6L9W6 998 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 MAPKAPK5Q8IW41 473 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 WRNIP1Q96S55 665 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 OSBPL5Q9H0X9 879 aaPredicted RBP14.66□□□□□ -0.06
USP8-212ENST00000560730 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 PI4K2BQ8TCG2 481 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 RIOK1Q9BRS2 568 aaKnown RBP14.66□□□□□ -0.06
USP8-212ENST00000560730 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 ZNF112Q9UJU3 913 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 SNCAIPQ9Y6H5 919 aa14.66□□□□□ -0.06
USP8-212ENST00000560730 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 MX1P20591 662 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 ADD2P35612 726 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 MAP3K10Q02779 954 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 LNPKQ9C0E8 428 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 FLT1P17948 1338 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
USP8-212ENST00000560730 LAMB1P07942 1786 aa14.64□□□□□ -0.07
USP8-212ENST00000560730 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
USP8-212ENST00000560730 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
USP8-212ENST00000560730 OPTNQ96CV9 577 aa14.64□□□□□ -0.07
USP8-212ENST00000560730 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
USP8-212ENST00000560730 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
USP8-212ENST00000560730 CSADQ9Y600 493 aa14.64□□□□□ -0.07
USP8-212ENST00000560730 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
USP8-212ENST00000560730 CASP8AP2Q9UKL3 1982 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 HSPA8P11142 646 aaKnown RBP14.63□□□□□ -0.07
USP8-212ENST00000560730 NUCB1Q02818 461 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 LCORLQ8N3X6 602 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 BEGAINQ9BUH8 593 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP8-212ENST00000560730 RNF186Q9NXI6 227 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 STAP2Q9UGK3 403 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 PALD1Q9ULE6 856 aa14.63□□□□□ -0.07
USP8-212ENST00000560730 ERC2O15083 957 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 TRPA1O75762 1119 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 GLRX3O76003 335 aaKnown RBP14.62□□□□□ -0.07
USP8-212ENST00000560730 ZBTB48P10074 688 aaPredicted RBP14.62□□□□□ -0.07
USP8-212ENST00000560730 USP5P45974 858 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 TM4SF4P48230 202 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 CTCFP49711 727 aaPredicted RBP14.62□□□□□ -0.07
USP8-212ENST00000560730 LBX1P52954 281 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 PDE1AP54750 535 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 SLC4A8Q2Y0W8 1093 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 KBTBD3Q8NAB2 608 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 ARMT1Q9H993 441 aa14.62□□□□□ -0.07
USP8-212ENST00000560730 BAZ2AQ9UIF9 1905 aaKnown RBP14.62□□□□□ -0.07
USP8-212ENST00000560730 SPDYE5A6NIY4 337 aa14.61□□□□□ -0.07
USP8-212ENST00000560730 TBC1D12O60347 775 aa14.61□□□□□ -0.07
USP8-212ENST00000560730 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
USP8-212ENST00000560730 UBE3CQ15386 1083 aa14.61□□□□□ -0.07
USP8-212ENST00000560730 CHD1LQ86WJ1 897 aa14.61□□□□□ -0.07
USP8-212ENST00000560730 MS4A4AQ96JQ5 239 aa14.61□□□□□ -0.07
USP8-212ENST00000560730 PUS7LQ9H0K6 701 aaKnown RBP14.61□□□□□ -0.07
USP8-212ENST00000560730 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP8-212ENST00000560730 NAV1Q8NEY1 1877 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms