RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 PIK3R2O00459 728 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 AOC2O75106 756 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 CLCQ05315 142 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 RING1Q06587 406 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 IGF2-ASQ6U949 168 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 SHDQ96IW2 340 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 SRRTQ9BXP5 876 aaKnown RBP8.67□□□□□ -1.02
MARK3-220ENST00000560417 ZNF408Q9H9D4 720 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 TACC3Q9Y6A5 838 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
MARK3-220ENST00000560417 ELNP15502 786 aa8.66□□□□□ -1.02
MARK3-220ENST00000560417 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
MARK3-220ENST00000560417 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
MARK3-220ENST00000560417 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
MARK3-220ENST00000560417 KIAA1211Q6ZU35 1233 aa8.66□□□□□ -1.02
MARK3-220ENST00000560417 CYFIP1Q7L576 1253 aa8.66□□□□□ -1.02
MARK3-220ENST00000560417 DNAJC2Q99543 621 aaKnown RBP8.66□□□□□ -1.02
MARK3-220ENST00000560417 PPT2Q9UMR5 302 aa8.66□□□□□ -1.02
MARK3-220ENST00000560417 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
MARK3-220ENST00000560417 MCM4P33991 863 aa8.65□□□□□ -1.02
MARK3-220ENST00000560417 ETFBP38117 255 aa8.65□□□□□ -1.02
MARK3-220ENST00000560417 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
MARK3-220ENST00000560417 RBBP8NLQ8NC74 664 aaPredicted RBP8.65□□□□□ -1.02
MARK3-220ENST00000560417 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
MARK3-220ENST00000560417 STK10O94804 968 aaKnown RBP8.64□□□□□ -1.03
MARK3-220ENST00000560417 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 GIPRP48546 466 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 CCDC81Q6ZN84 652 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 GK5Q6ZS86 529 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
MARK3-220ENST00000560417 HDXQ7Z353 690 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
MARK3-220ENST00000560417 SUGCTQ9HAC7 445 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 PCDHB14Q9Y5E9 798 aa8.64□□□□□ -1.03
MARK3-220ENST00000560417 CNTNAP5Q8WYK1 1306 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 DCDC2CA8MYV0 355 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 TMPRSS2O15393 492 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 GRIN3BO60391 1043 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 IMPDH2P12268 514 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 ERVK-24P63145 666 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 TMEM130Q8N3G9 435 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
MARK3-220ENST00000560417 LNPKQ9C0E8 428 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
MARK3-220ENST00000560417 CRIM1Q9NZV1 1036 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 ADAMTS8Q9UP79 889 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
MARK3-220ENST00000560417 ID3Q02535 119 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 ACAD11Q709F0 780 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 DPH6Q7L8W6 267 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 C12orf40Q86WS4 652 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
MARK3-220ENST00000560417 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 FERD3LQ96RJ6 166 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 HIF3AQ9Y2N7 669 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 CORINQ9Y5Q5 1042 aa8.62□□□□□ -1.03
MARK3-220ENST00000560417 MEIS3P2A8K0S8 358 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 HTR3BO95264 441 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 TIAF1O95411 115 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 NTF4P34130 210 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
MARK3-220ENST00000560417 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 TMEM201Q5SNT2 666 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 FAM169BQ8N8A8 192 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 CPLX3Q8WVH0 158 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 GSX1Q9H4S2 264 aaPredicted RBP8.61□□□□□ -1.03
MARK3-220ENST00000560417 RAD18Q9NS91 495 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 PRKAG3Q9UGI9 489 aa8.61□□□□□ -1.03
MARK3-220ENST00000560417 KLF4O43474 513 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 SPATA31C1P0DKV0 1188 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 GRIK4Q16099 956 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 OR6P1Q8NGX9 317 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 CYP4F12Q9HCS2 524 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 DISC1Q9NRI5 854 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 CSADQ9Y600 493 aa8.6□□□□□ -1.03
MARK3-220ENST00000560417 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
MARK3-220ENST00000560417 ADH5P11766 374 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 COL8A1P27658 744 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 SOX4Q06945 474 aaPredicted RBP8.59□□□□□ -1.03
MARK3-220ENST00000560417 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 LSRQ86X29 649 aaPredicted RBP8.59□□□□□ -1.03
MARK3-220ENST00000560417 CKAP2LQ8IYA6 745 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
MARK3-220ENST00000560417 ANAPC16Q96DE5 110 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
MARK3-220ENST00000560417 ADAM30Q9UKF2 790 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms