RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ZSCAN22P10073 491 aaPredicted RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 HCLS1P14317 486 aaPredicted RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 VAMP1P23763 118 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 NEK4P51957 841 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 CEP85Q6P2H3 762 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 ZNF784Q8NCA9 323 aaPredicted RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 CCDC112Q8NEF3 446 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 ERO1AQ96HE7 468 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 PYCARDQ9ULZ3 195 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 CHD1O14646 1710 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 SETD1AO15047 1707 aaKnown RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 TCHHQ07283 1943 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 ELP1O95163 1332 aa7.02□□□□□ -1.28
SNRPA1-209ENST00000560307 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 ITGB7P26010 798 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 COL19A1Q14993 1142 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 TWISTNBQ3B726 338 aaPredicted RBP7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 SLC9A9Q8IVB4 645 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 KIF1BPQ96EK5 621 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 RBCK1Q9BYM8 510 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 YY1AP1Q9H869 796 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 RAB6BQ9NRW1 208 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 TERF2IPQ9NYB0 399 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 CHMP3Q9Y3E7 222 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 PXDNLA1KZ92 1463 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 CACNA1FO60840 1977 aa7.02□□□□□ -1.29
SNRPA1-209ENST00000560307 DLC1Q96QB1 1528 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 PTPRMP28827 1452 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 ATP8B1O43520 1251 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 HTATSF1O43719 755 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 GADD45BO75293 160 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 F13A1P00488 732 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 TNNT1P13805 278 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 ESCO1Q5FWF5 840 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 MUM1L1Q5H9M0 696 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 CTR9Q6PD62 1173 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 SARM1Q6SZW1 724 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 ALYREFQ86V81 257 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 PLA2G4DQ86XP0 818 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 TDRD7Q8NHU6 1098 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 NGLY1Q96IV0 654 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 ZNF830Q96NB3 372 aaPredicted RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 EFCC1Q9HA90 598 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 CCDC87Q9NVE4 849 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 STAP2Q9UGK3 403 aa7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 CFAP65Q6ZU64 1925 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 MAP2P11137 1827 aaKnown RBP7.01□□□□□ -1.29
SNRPA1-209ENST00000560307 FAM208AQ9UK61 1670 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 LDHBP07195 334 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 CYP2C19P33261 490 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 CTSOP43234 321 aaPredicted RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 KCNJ4P48050 445 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 KCNJ6P48051 423 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 PDE1AP54750 535 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 ZC3H6P61129 1189 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 SNRPNP63162 240 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 RBM6P78332 1123 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 PLCB3Q01970 1234 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 CBLBQ13191 982 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 BMS1Q14692 1282 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 GRIN2CQ14957 1233 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 C9orf131Q5VYM1 1079 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 ALKBH2Q6NS38 261 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 RBM43Q6ZSC3 357 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 NBPF11Q86T75 865 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 CCDC116Q8IYX3 515 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 JARID2Q92833 1246 aaPredicted RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 ACDQ96AP0 544 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 ZSCAN31Q96LW9 406 aaPredicted RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 FAM161BQ96MY7 647 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 ARHGEF10LQ9HCE6 1279 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 POLMQ9NP87 494 aaPredicted RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 DDX19AQ9NUU7 478 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 MKL2Q9ULH7 1088 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 MON2Q7Z3U7 1717 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 XRN1Q8IZH2 1706 aaKnown RBP7□□□□□ -1.29
SNRPA1-209ENST00000560307 RAD50Q92878 1312 aa7□□□□□ -1.29
SNRPA1-209ENST00000560307 MSH6P52701 1360 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 A6NJY4 79 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 GPR25O00155 361 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 STX6O43752 255 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 NPR3P17342 541 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 HSPA4P34932 840 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 TPM4P67936 248 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 MAP3K11Q16584 847 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 COX20Q5RI15 118 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 TEX35Q5T0J7 233 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 HDGFL2Q7Z4V5 671 aaPredicted RBP6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 TXLNBQ8N3L3 684 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 1575.3 ms