RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TGFBRAP1Q8WUH2 860 aa19.72■□□□□ 0.75
TPM1-219ENST00000559397 SDR42E1Q8WUS8 393 aa19.72■□□□□ 0.75
TPM1-219ENST00000559397 IDI2Q9BXS1 227 aa19.72■□□□□ 0.75
TPM1-219ENST00000559397 GSG1L2A8MUP6 293 aa19.71■□□□□ 0.75
TPM1-219ENST00000559397 PNMA8AQ86V59 439 aaPredicted RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 DDX4Q9NQI0 724 aaKnown RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 FAM198AQ9UFP1 575 aa19.71■□□□□ 0.75
TPM1-219ENST00000559397 MKRN1Q9UHC7 482 aaKnown RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 NECTIN1Q15223 517 aa19.71■□□□□ 0.75
TPM1-219ENST00000559397 FKBP1CQ5VVH2 108 aa19.71■□□□□ 0.75
TPM1-219ENST00000559397 EPB41L4AQ9HCS5 686 aaPredicted RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 PGAP2Q9UHJ9 254 aa19.71■□□□□ 0.75
TPM1-219ENST00000559397 RPAP1Q9BWH6 1393 aaPredicted RBP19.71■□□□□ 0.75
TPM1-219ENST00000559397 ANGEL2Q5VTE6 544 aaKnown RBP19.7■□□□□ 0.74
TPM1-219ENST00000559397 VEZTQ9HBM0 779 aa19.7■□□□□ 0.74
TPM1-219ENST00000559397 DCP1AQ9NPI6 582 aaPredicted RBP19.7■□□□□ 0.74
TPM1-219ENST00000559397 ATP8A2Q9NTI2 1148 aa19.7■□□□□ 0.74
TPM1-219ENST00000559397 TMOD2Q9NZR1 351 aa19.7■□□□□ 0.74
TPM1-219ENST00000559397 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
TPM1-219ENST00000559397 FLT1P17948 1338 aa19.7■□□□□ 0.74
TPM1-219ENST00000559397 USP5P45974 858 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 GIMAP6Q6P9H5 292 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 IFNL3Q8IZI9 196 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 ZC3H15Q8WU90 426 aaKnown RBP19.69■□□□□ 0.74
TPM1-219ENST00000559397 DSCC1Q9BVC3 393 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 GGA3Q9NZ52 723 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 RBM8AQ9Y5S9 174 aaKnown RBP19.69■□□□□ 0.74
TPM1-219ENST00000559397 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
TPM1-219ENST00000559397 NAV1Q8NEY1 1877 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 PITPNM2Q9BZ72 1349 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 DDX60LQ5H9U9 1706 aaKnown RBP19.69■□□□□ 0.74
TPM1-219ENST00000559397 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
TPM1-219ENST00000559397 TCP10L2B9ZVM9 353 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
TPM1-219ENST00000559397 PICALMQ13492 652 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 EAPPQ56P03 285 aaPredicted RBP19.68■□□□□ 0.74
TPM1-219ENST00000559397 RASEFQ8IZ41 740 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 BAZ2AQ9UIF9 1905 aaKnown RBP19.68■□□□□ 0.74
TPM1-219ENST00000559397 ST18O60284 1047 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 ENTPD3O75355 529 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 POTEIP0CG38 1075 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 POTEJP0CG39 1038 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 ALX1Q15699 326 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 ZFPM1Q8IX07 1006 aa19.68■□□□□ 0.74
TPM1-219ENST00000559397 OSBPL5Q9H0X9 879 aaPredicted RBP19.68■□□□□ 0.74
TPM1-219ENST00000559397 SCAF8Q9UPN6 1271 aaKnown RBP19.68■□□□□ 0.74
TPM1-219ENST00000559397 APPP05067 770 aa19.67■□□□□ 0.74
TPM1-219ENST00000559397 APOBEC3FQ8IUX4 373 aaKnown RBP19.67■□□□□ 0.74
TPM1-219ENST00000559397 MYH1P12882 1939 aa19.67■□□□□ 0.74
TPM1-219ENST00000559397 FGAP02671 866 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 YY1P25490 414 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 TCP10Q12799 353 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 FAM151AQ8WW52 585 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 NACAP1Q9BZK3 213 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 GPBP1L1Q9HC44 474 aaPredicted RBP19.66■□□□□ 0.74
TPM1-219ENST00000559397 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
TPM1-219ENST00000559397 NEK4P51957 841 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 SH3BP5LQ7L8J4 393 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 COL2A1P02458 1487 aaPredicted RBP19.65■□□□□ 0.74
TPM1-219ENST00000559397 TDO2P48775 406 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 TNNI2P48788 182 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 TNFAIP1Q13829 316 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 RASA3Q14644 834 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 NAPBQ9H115 298 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 DEFB129Q9H1M3 183 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 MCM9Q9NXL9 1143 aa19.65■□□□□ 0.74
TPM1-219ENST00000559397 SLC27A2O14975 620 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 SBK1Q52WX2 424 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 CTR9Q6PD62 1173 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 LDHDQ86WU2 507 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 DCPSQ96C86 337 aaKnown RBP19.64■□□□□ 0.73
TPM1-219ENST00000559397 TMEM39BQ9GZU3 492 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
TPM1-219ENST00000559397 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
TPM1-219ENST00000559397 ATRNL1Q5VV63 1379 aa19.64■□□□□ 0.73
TPM1-219ENST00000559397 DDTLA6NHG4 134 aaPredicted RBP19.63■□□□□ 0.73
TPM1-219ENST00000559397 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
TPM1-219ENST00000559397 USP17L21D6R901 530 aa19.63■□□□□ 0.73
TPM1-219ENST00000559397 MCM2P49736 904 aa19.63■□□□□ 0.73
TPM1-219ENST00000559397 TEPSINQ96N21 525 aa19.63■□□□□ 0.73
TPM1-219ENST00000559397 ARPP21Q9UBL0 812 aaPredicted RBP19.63■□□□□ 0.73
TPM1-219ENST00000559397 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
TPM1-219ENST00000559397 KIF3CO14782 793 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 CYP2D6P10635 497 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
TPM1-219ENST00000559397 EVX2Q03828 476 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 RNF20Q5VTR2 975 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 CDAN1Q8IWY9 1227 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 SIPA1L1O43166 1804 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 LAMB1P07942 1786 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 CYP2D7A0A087X1C5 515 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 SMIM22K7EJ46 135 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 PLCD1P51178 756 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 C12orf60Q5U649 245 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms