RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NOL9Q5SY16 702 aaKnown RBP20.92■□□□□ 0.94
LRRC28-210ENST00000558879 OTUD7BQ6GQQ9 843 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 TBC1D9Q6ZT07 1266 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 DBNLQ9UJU6 430 aaKnown RBP20.92■□□□□ 0.94
LRRC28-210ENST00000558879 HTTP42858 3142 aa20.91■□□□□ 0.94
LRRC28-210ENST00000558879 CCL15-CCL14A0A0B4J2E2 113 aa20.91■□□□□ 0.94
LRRC28-210ENST00000558879 PPIL2Q13356 520 aa20.91■□□□□ 0.94
LRRC28-210ENST00000558879 CCL15Q16663 113 aa20.91■□□□□ 0.94
LRRC28-210ENST00000558879 SH3BP5LQ7L8J4 393 aa20.91■□□□□ 0.94
LRRC28-210ENST00000558879 NAV1Q8NEY1 1877 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 IRF6O14896 467 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 NPM3O75607 178 aaKnown RBP20.9■□□□□ 0.94
LRRC28-210ENST00000558879 RGS19P49795 217 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 CCDC158Q5M9N0 1113 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 TTC39AQ5SRH9 613 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 TLR7Q9NYK1 1049 aaKnown RBP20.9■□□□□ 0.94
LRRC28-210ENST00000558879 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 DDX19BQ9UMR2 479 aa20.9■□□□□ 0.94
LRRC28-210ENST00000558879 MAP4K4O95819 1239 aaPredicted RBP20.89■□□□□ 0.93
LRRC28-210ENST00000558879 GSTO1P78417 241 aa20.89■□□□□ 0.93
LRRC28-210ENST00000558879 MAP3K10Q02779 954 aa20.89■□□□□ 0.93
LRRC28-210ENST00000558879 PPATQ06203 517 aa20.89■□□□□ 0.93
LRRC28-210ENST00000558879 FAM43AQ8N2R8 423 aa20.89■□□□□ 0.93
LRRC28-210ENST00000558879 EAF2Q96CJ1 260 aaPredicted RBP20.89■□□□□ 0.93
LRRC28-210ENST00000558879 DDTLA6NHG4 134 aaPredicted RBP20.88■□□□□ 0.93
LRRC28-210ENST00000558879 LDHCP07864 332 aa20.88■□□□□ 0.93
LRRC28-210ENST00000558879 ZCCHC17Q9NP64 241 aaKnown RBP20.88■□□□□ 0.93
LRRC28-210ENST00000558879 EXOC6BQ9Y2D4 811 aa20.88■□□□□ 0.93
LRRC28-210ENST00000558879 COG6Q9Y2V7 657 aa20.88■□□□□ 0.93
LRRC28-210ENST00000558879 PHF20L1A8MW92 1017 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 IGSF3O75054 1194 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 CYP2E1P05181 493 aaPredicted RBP20.87■□□□□ 0.93
LRRC28-210ENST00000558879 CETPP11597 493 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 FBXO46Q6PJ61 603 aaPredicted RBP20.87■□□□□ 0.93
LRRC28-210ENST00000558879 ERC1Q8IUD2 1116 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 SNRKQ9NRH2 765 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 ZBTB40Q9NUA8 1239 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 HPS5Q9UPZ3 1129 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 KCNH4Q9UQ05 1017 aa20.87■□□□□ 0.93
LRRC28-210ENST00000558879 SNAPC2Q13487 334 aa20.86■□□□□ 0.93
LRRC28-210ENST00000558879 PICALMQ13492 652 aa20.86■□□□□ 0.93
LRRC28-210ENST00000558879 TAF1CQ15572 869 aaPredicted RBP20.86■□□□□ 0.93
LRRC28-210ENST00000558879 CCDC8Q9H0W5 538 aaPredicted RBP20.86■□□□□ 0.93
LRRC28-210ENST00000558879 LRP2BPQ9P2M1 347 aa20.86■□□□□ 0.93
LRRC28-210ENST00000558879 MYH8P13535 1937 aa20.86■□□□□ 0.93
LRRC28-210ENST00000558879 ZAP70P43403 619 aa20.85■□□□□ 0.93
LRRC28-210ENST00000558879 ERO1AQ96HE7 468 aa20.85■□□□□ 0.93
LRRC28-210ENST00000558879 BTBD19C9JJ37 291 aa20.84■□□□□ 0.93
LRRC28-210ENST00000558879 CAP1Q01518 475 aa20.84■□□□□ 0.93
LRRC28-210ENST00000558879 OTOP1Q7RTM1 612 aa20.84■□□□□ 0.93
LRRC28-210ENST00000558879 SIRT2Q8IXJ6 389 aa20.84■□□□□ 0.93
LRRC28-210ENST00000558879 RPAP2Q8IXW5 612 aaPredicted RBP20.84■□□□□ 0.93
LRRC28-210ENST00000558879 SCYL3Q8IZE3 742 aa20.84■□□□□ 0.93
LRRC28-210ENST00000558879 OSBPL5Q9H0X9 879 aaPredicted RBP20.84■□□□□ 0.93
LRRC28-210ENST00000558879 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 SP3Q02447 781 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 MOGSQ13724 837 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 NAA16Q6N069 864 aaPredicted RBP20.83■□□□□ 0.93
LRRC28-210ENST00000558879 ADGRA1Q86SQ6 560 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 ZSCAN29Q8IWY8 852 aaPredicted RBP20.83■□□□□ 0.93
LRRC28-210ENST00000558879 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
LRRC28-210ENST00000558879 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 CD99L2Q8TCZ2 262 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 ZFYVE28Q9HCC9 887 aa20.83■□□□□ 0.93
LRRC28-210ENST00000558879 PIH1D3Q9NQM4 214 aaKnown RBP20.83■□□□□ 0.93
LRRC28-210ENST00000558879 TNRC18O15417 2968 aaPredicted RBP20.83■□□□□ 0.92
LRRC28-210ENST00000558879 TBC1D12O60347 775 aa20.82■□□□□ 0.92
LRRC28-210ENST00000558879 PDE3AQ14432 1141 aa20.82■□□□□ 0.92
LRRC28-210ENST00000558879 TRIM17Q9Y577 477 aa20.82■□□□□ 0.92
LRRC28-210ENST00000558879 ADGRA2Q96PE1 1338 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 TLR2O60603 784 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 PPP4CP60510 307 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 AACSQ86V21 672 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 TEX11Q8IYF3 940 aa20.81■□□□□ 0.92
LRRC28-210ENST00000558879 SH3RF3Q8TEJ3 882 aaPredicted RBP20.81■□□□□ 0.92
LRRC28-210ENST00000558879 CHMP4BQ9H444 224 aaKnown RBP20.81■□□□□ 0.92
LRRC28-210ENST00000558879 AATFQ9NY61 560 aaKnown RBP eCLIP20.81■□□□□ 0.92
LRRC28-210ENST00000558879 HMMRO75330 724 aa20.8■□□□□ 0.92
LRRC28-210ENST00000558879 PTPRAP18433 802 aa20.8■□□□□ 0.92
LRRC28-210ENST00000558879 C20orf194Q5TEA3 1177 aa20.8■□□□□ 0.92
LRRC28-210ENST00000558879 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
LRRC28-210ENST00000558879 CENPFP49454 3210 aa20.8■□□□□ 0.92
LRRC28-210ENST00000558879 BAZ2AQ9UIF9 1905 aaKnown RBP20.79■□□□□ 0.92
LRRC28-210ENST00000558879 DOCK3Q8IZD9 2030 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 CTNND1O60716 968 aaKnown RBP20.79■□□□□ 0.92
LRRC28-210ENST00000558879 BAG3O95817 575 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 PLCG2P16885 1265 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 SOX10P56693 466 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 KIF1BPQ96EK5 621 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
LRRC28-210ENST00000558879 PDE4DIPQ5VU43 2346 aa20.79■□□□□ 0.92
LRRC28-210ENST00000558879 FLT1P17948 1338 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 A0A0G2JLL6 359 aaPredicted RBP20.78■□□□□ 0.92
LRRC28-210ENST00000558879 FAM196BA6NMK8 535 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 CXCL11O14625 94 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 MLLT1Q03111 559 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms