RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 PDE6BP35913 854 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
SCG3-203ENST00000558709 PTK7Q13308 1070 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 DEFB115Q30KQ5 88 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.73
SCG3-203ENST00000558709 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
SCG3-203ENST00000558709 ZDHHC1Q8WTX9 485 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 BRIP1Q9BX63 1249 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
SCG3-203ENST00000558709 NUP98P52948 1817 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 FAM196BA6NMK8 535 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 RASA1P20936 1047 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 LBRQ14739 615 aaKnown RBP10.51□□□□□ -0.73
SCG3-203ENST00000558709 ZNF594Q96JF6 807 aaPredicted RBP10.51□□□□□ -0.73
SCG3-203ENST00000558709 CNTNAP3BQ96NU0 1288 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 CNTNAP3Q9BZ76 1288 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 NUCKS1Q9H1E3 243 aaKnown RBP10.51□□□□□ -0.73
SCG3-203ENST00000558709 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 GPAMQ9HCL2 828 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 HACL1Q9UJ83 578 aa10.51□□□□□ -0.73
SCG3-203ENST00000558709 EPHX2P34913 555 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 AKAP4Q5JQC9 854 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 MAP1SQ66K74 1059 aaPredicted RBP10.5□□□□□ -0.73
SCG3-203ENST00000558709 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 ZSCAN1Q8NBB4 408 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 ABT1Q9ULW3 272 aaKnown RBP10.5□□□□□ -0.73
SCG3-203ENST00000558709 RNF123Q5XPI4 1314 aa10.5□□□□□ -0.73
SCG3-203ENST00000558709 SFI1A8K8P3 1242 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 EIF5P55010 431 aaKnown RBP10.49□□□□□ -0.73
SCG3-203ENST00000558709 TEAD4Q15561 434 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 SOGA3Q5TF21 947 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 STYK1Q6J9G0 422 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 CNTROBQ8N137 903 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 CNBD1Q8NA66 436 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 GTPBP3Q969Y2 492 aaKnown RBP10.49□□□□□ -0.73
SCG3-203ENST00000558709 ZDHHC3Q9NYG2 299 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 COL4A5P29400 1685 aa10.49□□□□□ -0.73
SCG3-203ENST00000558709 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L10C9JJH3 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L12C9JPN9 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L21D6R901 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 RNMTO43148 476 aaKnown RBP10.48□□□□□ -0.73
SCG3-203ENST00000558709 SRGNP10124 158 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 GRM1Q13255 1194 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 CAPNS2Q96L46 248 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
SCG3-203ENST00000558709 LAMB4A4D0S4 1761 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 A0A087WZG4 1122 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 GPR25O00155 361 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 NPHP1O15259 732 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 PNMA8AQ86V59 439 aaPredicted RBP10.47□□□□□ -0.73
SCG3-203ENST00000558709 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
SCG3-203ENST00000558709 MASTLQ96GX5 879 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCG3-203ENST00000558709 ZNF277Q9NRM2 450 aaPredicted RBP10.47□□□□□ -0.73
SCG3-203ENST00000558709 NDFIP2Q9NV92 336 aa10.47□□□□□ -0.73
SCG3-203ENST00000558709 SEC13P55735 322 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 ST5P78524 1137 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCG3-203ENST00000558709 FMR1Q06787 632 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCG3-203ENST00000558709 TBCELQ5QJ74 424 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 CYP4F22Q6NT55 531 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 OLFM4Q6UX06 510 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.73
SCG3-203ENST00000558709 TSPAN10Q9H1Z9 355 aaPredicted RBP10.46□□□□□ -0.73
SCG3-203ENST00000558709 LAMB2P55268 1798 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 EML1O00423 815 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 STARD3NLO95772 234 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 IL13P35225 146 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 HIRAP54198 1017 aaPredicted RBP10.45□□□□□ -0.74
SCG3-203ENST00000558709 DPYDQ12882 1025 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 GPR101Q96P66 508 aaPredicted RBP10.45□□□□□ -0.74
SCG3-203ENST00000558709 SETDB2Q96T68 719 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 MCOLN1Q9GZU1 580 aa10.45□□□□□ -0.74
SCG3-203ENST00000558709 SNED1Q8TER0 1413 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 HEG1Q9ULI3 1381 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 FZD9O00144 591 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 CAMTA2O94983 1202 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 NOS2P35228 1153 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 TXLNAP40222 546 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 ECE1P42892 770 aa10.44□□□□□ -0.74
SCG3-203ENST00000558709 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
SCG3-203ENST00000558709 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms