RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 LRRFIP1Q32MZ4 808 aaKnown RBP10.86□□□□□ -0.67
SPG11-207ENST00000558138 MAPKAPK5Q8IW41 473 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 JMYQ8N9B5 988 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 ZNF384Q8TF68 577 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 IDI2Q9BXS1 227 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 USP2O75604 605 aaPredicted RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 GLRX3O76003 335 aaKnown RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 MAP2K2P36507 400 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 KIF23Q02241 960 aaPredicted RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 ADGRA1Q86SQ6 560 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 CRACR2BQ8N4Y2 399 aaPredicted RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 FSD1Q9BTV5 496 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 CRNKL1Q9BZJ0 848 aaKnown RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 OSBPL5Q9H0X9 879 aaPredicted RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 DDX4Q9NQI0 724 aaKnown RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 SAP30BPQ9UHR5 308 aaKnown RBP10.85□□□□□ -0.67
SPG11-207ENST00000558138 DOCK2Q92608 1830 aa10.85□□□□□ -0.67
SPG11-207ENST00000558138 CEP350Q5VT06 3117 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 WDHD1O75717 1129 aaPredicted RBP10.84□□□□□ -0.67
SPG11-207ENST00000558138 IGHDP01880 384 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 RHBDL3P58872 404 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 SREBF2Q12772 1141 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 VGLL4Q14135 290 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 OTUD7AQ8TE49 926 aaPredicted RBP10.84□□□□□ -0.67
SPG11-207ENST00000558138 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.84□□□□□ -0.67
SPG11-207ENST00000558138 FLT1P17948 1338 aa10.84□□□□□ -0.67
SPG11-207ENST00000558138 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
SPG11-207ENST00000558138 FAM155AB1AL88 458 aaPredicted RBP10.83□□□□□ -0.68
SPG11-207ENST00000558138 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
SPG11-207ENST00000558138 ADD2P35612 726 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 PPP4CP60510 307 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 MAP3K11Q16584 847 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 AMOTL1Q8IY63 956 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 OPTNQ96CV9 577 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 WNK4Q96J92 1243 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 PICK1Q9NRD5 415 aa10.83□□□□□ -0.68
SPG11-207ENST00000558138 RFX7Q2KHR2 1363 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 MBD4O95243 580 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 ZFYP08048 801 aaPredicted RBP10.82□□□□□ -0.68
SPG11-207ENST00000558138 LDLRAD1Q5T700 205 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 SPRYD7Q5W111 196 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 SMC5Q8IY18 1101 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 REM2Q8IYK8 340 aaPredicted RBP10.82□□□□□ -0.68
SPG11-207ENST00000558138 KBTBD3Q8NAB2 608 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPG11-207ENST00000558138 ZKSCAN4Q969J2 545 aaPredicted RBP10.82□□□□□ -0.68
SPG11-207ENST00000558138 RILPL2Q969X0 211 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 DHX36Q9H2U1 1008 aaKnown RBP10.82□□□□□ -0.68
SPG11-207ENST00000558138 ARMT1Q9H993 441 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 PALD1Q9ULE6 856 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 OTOFQ9HC10 1997 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 MYH7P12883 1935 aa10.82□□□□□ -0.68
SPG11-207ENST00000558138 MANSC4A6NHS7 340 aaPredicted RBP10.81□□□□□ -0.68
SPG11-207ENST00000558138 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 FOXN1O15353 648 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
SPG11-207ENST00000558138 CA12O43570 354 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
SPG11-207ENST00000558138 ZBTB48P10074 688 aaPredicted RBP10.81□□□□□ -0.68
SPG11-207ENST00000558138 INPP5BP32019 993 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 CTCFP49711 727 aaPredicted RBP10.81□□□□□ -0.68
SPG11-207ENST00000558138 PDE1AP54750 535 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 NUCB1Q02818 461 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 UBE3CQ15386 1083 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 SLFNL1Q499Z3 407 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 OTUD7BQ6GQQ9 843 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 SH3BP5LQ7L8J4 393 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 LCORLQ8N3X6 602 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 ZIC5Q96T25 663 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 MCM9Q9NXL9 1143 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 PI4KBQ9UBF8 816 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 SLC4A4Q9Y6R1 1079 aa10.81□□□□□ -0.68
SPG11-207ENST00000558138 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 APPP05067 770 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.8□□□□□ -0.68
SPG11-207ENST00000558138 TTC6Q86TZ1 520 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 ERO1BQ86YB8 467 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 SDR42E1Q8WUS8 393 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 HERC5Q9UII4 1024 aaKnown RBP10.8□□□□□ -0.68
SPG11-207ENST00000558138 SNCAIPQ9Y6H5 919 aa10.8□□□□□ -0.68
SPG11-207ENST00000558138 NAV1Q8NEY1 1877 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms