RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
ABCD4-227ENST00000557554 PHIPQ8WWQ0 1821 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 GNAI1P63096 354 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 SHHQ15465 462 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 EPHA10Q5JZY3 1008 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
ABCD4-227ENST00000557554 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
ABCD4-227ENST00000557554 AK9Q5TCS8 1911 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.37
ABCD4-227ENST00000557554 TCP10Q12799 353 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 NFIAQ12857 509 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 SUGT1Q9Y2Z0 365 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
ABCD4-227ENST00000557554 SMAD3P84022 425 aaKnown RBP12.75□□□□□ -0.37
ABCD4-227ENST00000557554 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 CDC42EP5Q6NZY7 148 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-227ENST00000557554 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
ABCD4-227ENST00000557554 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 CNNM1Q9NRU3 951 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 AGTPBP1Q9UPW5 1226 aa12.75□□□□□ -0.37
ABCD4-227ENST00000557554 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
ABCD4-227ENST00000557554 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
ABCD4-227ENST00000557554 FOSL2P15408 326 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-227ENST00000557554 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-227ENST00000557554 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
ABCD4-227ENST00000557554 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
ABCD4-227ENST00000557554 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
ABCD4-227ENST00000557554 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
ABCD4-227ENST00000557554 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
ABCD4-227ENST00000557554 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
ABCD4-227ENST00000557554 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 MAST3O60307 1309 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-227ENST00000557554 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-227ENST00000557554 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 USP6NLQ92738 828 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
ABCD4-227ENST00000557554 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
ABCD4-227ENST00000557554 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.37
ABCD4-227ENST00000557554 SLURP2P0DP57 97 aa12.71□□□□□ -0.37
ABCD4-227ENST00000557554 CYP2B6P20813 491 aa12.71□□□□□ -0.37
ABCD4-227ENST00000557554 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
ABCD4-227ENST00000557554 SENP6Q9GZR1 1112 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-227ENST00000557554 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-227ENST00000557554 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-227ENST00000557554 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
ABCD4-227ENST00000557554 FLIIQ13045 1269 aa12.7□□□□□ -0.38
ABCD4-227ENST00000557554 GRIN2CQ14957 1233 aa12.7□□□□□ -0.38
ABCD4-227ENST00000557554 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-227ENST00000557554 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
ABCD4-227ENST00000557554 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-227ENST00000557554 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
ABCD4-227ENST00000557554 ASB2Q96Q27 587 aa12.7□□□□□ -0.38
ABCD4-227ENST00000557554 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
ABCD4-227ENST00000557554 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
ABCD4-227ENST00000557554 RALBP1Q15311 655 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
ABCD4-227ENST00000557554 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-227ENST00000557554 MROH5Q6ZUA9 1318 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-227ENST00000557554 CCL14Q16627 93 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 TRMT44Q8IYL2 757 aaKnown RBP12.68□□□□□ -0.38
ABCD4-227ENST00000557554 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
ABCD4-227ENST00000557554 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 RLFQ13129 1914 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-227ENST00000557554 APAF1O14727 1248 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 PEX10O60683 326 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 ENTPD3O75355 529 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 PDE8BO95263 885 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-227ENST00000557554 MORN1Q5T089 497 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 BADQ92934 168 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms