RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SPATA5Q8NB90 893 aa17.46■□□□□ 0.39
SNX6-210ENST00000557341 MYH1P12882 1939 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 COL2A1P02458 1487 aaPredicted RBP17.45■□□□□ 0.38
SNX6-210ENST00000557341 BTBD19C9JJ37 291 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
SNX6-210ENST00000557341 POLA2Q14181 598 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 PI16Q6UXB8 463 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SNX6-210ENST00000557341 PTPN22Q9Y2R2 807 aa17.45■□□□□ 0.38
SNX6-210ENST00000557341 TLR2O60603 784 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 MCAMP43121 646 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 GSTO1P78417 241 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 PICALMQ13492 652 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 KCNH4Q9UQ05 1017 aa17.44■□□□□ 0.38
SNX6-210ENST00000557341 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
SNX6-210ENST00000557341 MKI67P46013 3256 aaKnown RBP17.44■□□□□ 0.38
SNX6-210ENST00000557341 GPR75-ASB3A0A0A6YYF3 556 aa17.43■□□□□ 0.38
SNX6-210ENST00000557341 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
SNX6-210ENST00000557341 ZNF384Q8TF68 577 aa17.43■□□□□ 0.38
SNX6-210ENST00000557341 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
SNX6-210ENST00000557341 DDX4Q9NQI0 724 aaKnown RBP17.43■□□□□ 0.38
SNX6-210ENST00000557341 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
SNX6-210ENST00000557341 LDHCP07864 332 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 RLBP1P12271 317 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 RHBDL3P58872 404 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 CAP1Q01518 475 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 ANKRD23Q86SG2 305 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 SCYL3Q8IZE3 742 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
SNX6-210ENST00000557341 DDTLA6NHG4 134 aaPredicted RBP17.41■□□□□ 0.38
SNX6-210ENST00000557341 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
SNX6-210ENST00000557341 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
SNX6-210ENST00000557341 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
SNX6-210ENST00000557341 KIF22Q14807 665 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 TTC39AQ5SRH9 613 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
SNX6-210ENST00000557341 NAV1Q8NEY1 1877 aa17.4■□□□□ 0.38
SNX6-210ENST00000557341 PDHXO00330 501 aa17.4■□□□□ 0.38
SNX6-210ENST00000557341 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
SNX6-210ENST00000557341 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
SNX6-210ENST00000557341 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
SNX6-210ENST00000557341 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
SNX6-210ENST00000557341 MYH7P12883 1935 aa17.39■□□□□ 0.37
SNX6-210ENST00000557341 CXCL11O14625 94 aa17.39■□□□□ 0.37
SNX6-210ENST00000557341 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
SNX6-210ENST00000557341 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
SNX6-210ENST00000557341 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
SNX6-210ENST00000557341 MYH8P13535 1937 aa17.39■□□□□ 0.37
SNX6-210ENST00000557341 MOGSQ13724 837 aa17.38■□□□□ 0.37
SNX6-210ENST00000557341 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
SNX6-210ENST00000557341 PARK7Q99497 189 aaKnown RBP17.38■□□□□ 0.37
SNX6-210ENST00000557341 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
SNX6-210ENST00000557341 PTCH2Q9Y6C5 1203 aa17.38■□□□□ 0.37
SNX6-210ENST00000557341 ADGRA2Q96PE1 1338 aa17.38■□□□□ 0.37
SNX6-210ENST00000557341 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
SNX6-210ENST00000557341 TBC1D12O60347 775 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
SNX6-210ENST00000557341 GNRH1P01148 92 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 PTPRAP18433 802 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
SNX6-210ENST00000557341 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 C17orf99Q6UX52 265 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
SNX6-210ENST00000557341 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 SNRKQ9NRH2 765 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 CPA4Q9UI42 421 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 ZHX2Q9Y6X8 837 aa17.37■□□□□ 0.37
SNX6-210ENST00000557341 A0A0G2JLL6 359 aaPredicted RBP17.36■□□□□ 0.37
SNX6-210ENST00000557341 SLURP2P0DP57 97 aa17.36■□□□□ 0.37
SNX6-210ENST00000557341 FASTKD5Q7L8L6 764 aaKnown RBP17.36■□□□□ 0.37
SNX6-210ENST00000557341 PRRT2Q7Z6L0 340 aaPredicted RBP17.36■□□□□ 0.37
SNX6-210ENST00000557341 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
SNX6-210ENST00000557341 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNX6-210ENST00000557341 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
SNX6-210ENST00000557341 AFG3L2Q9Y4W6 797 aa17.36■□□□□ 0.37
SNX6-210ENST00000557341 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 IGSF3O75054 1194 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 BAG3O95817 575 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 CYP2E1P05181 493 aaPredicted RBP17.35■□□□□ 0.37
SNX6-210ENST00000557341 MS4A1P11836 297 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 PLCG2P16885 1265 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 PRMT2P55345 433 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 PRPF38BQ5VTL8 546 aaKnown RBP17.35■□□□□ 0.37
SNX6-210ENST00000557341 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
SNX6-210ENST00000557341 SH3RF3Q8TEJ3 882 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms