RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CSADQ9Y600 493 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
SLIRP-207ENST00000556831 GPR75-ASB3A0A0A6YYF3 556 aa17.13■□□□□ 0.33
SLIRP-207ENST00000556831 ENTPD3O75355 529 aa17.13■□□□□ 0.33
SLIRP-207ENST00000556831 RGS3P49796 1198 aa17.13■□□□□ 0.33
SLIRP-207ENST00000556831 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
SLIRP-207ENST00000556831 TMED8Q6PL24 325 aaPredicted RBP17.13■□□□□ 0.33
SLIRP-207ENST00000556831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.13■□□□□ 0.33
SLIRP-207ENST00000556831 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
SLIRP-207ENST00000556831 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 CERS3Q8IU89 383 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 TEX11Q8IYF3 940 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
SLIRP-207ENST00000556831 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
SLIRP-207ENST00000556831 PCDHB15Q9Y5E8 787 aa17.12■□□□□ 0.33
SLIRP-207ENST00000556831 GOLIM4O00461 696 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
SLIRP-207ENST00000556831 CYP7A1P22680 504 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
SLIRP-207ENST00000556831 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 WRNIP1Q96S55 665 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
SLIRP-207ENST00000556831 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
SLIRP-207ENST00000556831 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
SLIRP-207ENST00000556831 RHBDL3P58872 404 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 SPRYD7Q5W111 196 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
SLIRP-207ENST00000556831 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 LAMB1P07942 1786 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
SLIRP-207ENST00000556831 WDHD1O75717 1129 aaPredicted RBP17.09■□□□□ 0.33
SLIRP-207ENST00000556831 TRPA1O75762 1119 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 ATP5JP18859 108 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.331e-8■■■■■ 34
SLIRP-207ENST00000556831 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 BOLA2Q9H3K6 86 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
SLIRP-207ENST00000556831 ATRNL1Q5VV63 1379 aa17.08■□□□□ 0.32
SLIRP-207ENST00000556831 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
SLIRP-207ENST00000556831 VGLL4Q14135 290 aa17.08■□□□□ 0.32
SLIRP-207ENST00000556831 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
SLIRP-207ENST00000556831 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
SLIRP-207ENST00000556831 R3HDMLQ9H3Y0 253 aa17.08■□□□□ 0.32
SLIRP-207ENST00000556831 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.32
SLIRP-207ENST00000556831 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 INPP5BP32019 993 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 ZSCAN25Q6NSZ9 544 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 ZKSCAN4Q969J2 545 aaPredicted RBP17.07■□□□□ 0.32
SLIRP-207ENST00000556831 SAGE1Q9NXZ1 904 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 SNCAIPQ9Y6H5 919 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 SIPA1L1O43166 1804 aa17.07■□□□□ 0.32
SLIRP-207ENST00000556831 ERC2O15083 957 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 USP5P45974 858 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 OPTNQ96CV9 577 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 HAUS7Q99871 368 aa17.06■□□□□ 0.32
SLIRP-207ENST00000556831 OSBPL5Q9H0X9 879 aaPredicted RBP17.06■□□□□ 0.32
SLIRP-207ENST00000556831 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
SLIRP-207ENST00000556831 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 CHGBP05060 677 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 INHBEP58166 350 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 PPP4CP60510 307 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
SLIRP-207ENST00000556831 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 OTUD5Q96G74 571 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
SLIRP-207ENST00000556831 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
SLIRP-207ENST00000556831 A0A0C4DFX4 3053 aa17.05■□□□□ 0.32
SLIRP-207ENST00000556831 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
SLIRP-207ENST00000556831 ALDH1A1P00352 501 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 PDE6AP16499 860 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
SLIRP-207ENST00000556831 ERO1BQ86YB8 467 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
SLIRP-207ENST00000556831 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms