RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ADGRA1Q86SQ6 560 aa27.38■■□□□ 1.97
PABPN1-206ENST00000556809 ANTXR1Q9H6X2 564 aa27.38■■□□□ 1.97
PABPN1-206ENST00000556809 ATRNL1Q5VV63 1379 aa27.37■■□□□ 1.97
PABPN1-206ENST00000556809 NPM3O75607 178 aaKnown RBP27.37■■□□□ 1.97
PABPN1-206ENST00000556809 GJA5P36382 358 aa27.37■■□□□ 1.97
PABPN1-206ENST00000556809 SH3BP5LQ7L8J4 393 aa27.37■■□□□ 1.97
PABPN1-206ENST00000556809 CDK5RAP2Q96SN8 1893 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 PPP4CP60510 307 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 VGLL4Q14135 290 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 DCAF15Q66K64 600 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 B4GALNT3Q6L9W6 998 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 MIGA2Q7L4E1 593 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 GPATCH3Q96I76 525 aa27.36■■□□□ 1.97
PABPN1-206ENST00000556809 ATP5JP18859 108 aa27.35■■□□□ 1.97
PABPN1-206ENST00000556809 ELP3Q9H9T3 547 aa27.35■■□□□ 1.97
PABPN1-206ENST00000556809 ECHDC1Q9NTX5 307 aa27.35■■□□□ 1.97
PABPN1-206ENST00000556809 ZNF112Q9UJU3 913 aa27.35■■□□□ 1.97
PABPN1-206ENST00000556809 ZNF341Q9BYN7 854 aa27.34■■□□□ 1.97
PABPN1-206ENST00000556809 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.34■■□□□ 1.97
PABPN1-206ENST00000556809 FOCADQ5VW36 1801 aa27.34■■□□□ 1.97
PABPN1-206ENST00000556809 DDTLA6NHG4 134 aaPredicted RBP27.33■■□□□ 1.97
PABPN1-206ENST00000556809 TRPA1O75762 1119 aa27.33■■□□□ 1.97
PABPN1-206ENST00000556809 IDH1O75874 414 aaKnown RBP27.33■■□□□ 1.97
PABPN1-206ENST00000556809 MAP3K10Q02779 954 aa27.33■■□□□ 1.97
PABPN1-206ENST00000556809 PICALMQ13492 652 aa27.33■■□□□ 1.97
PABPN1-206ENST00000556809 OTUD7AQ8TE49 926 aaPredicted RBP27.33■■□□□ 1.97
PABPN1-206ENST00000556809 WRNIP1Q96S55 665 aa27.33■■□□□ 1.97
PABPN1-206ENST00000556809 AATFQ9NY61 560 aaKnown RBP eCLIP27.33■■□□□ 1.97
PABPN1-206ENST00000556809 SNCAIPQ9Y6H5 919 aa27.33■■□□□ 1.97
PABPN1-206ENST00000556809 MANSC4A6NHS7 340 aaPredicted RBP27.32■■□□□ 1.96
PABPN1-206ENST00000556809 NUCB1Q02818 461 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 SREBF2Q12772 1141 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 SH3RF3Q8TEJ3 882 aaPredicted RBP27.32■■□□□ 1.96
PABPN1-206ENST00000556809 ZKSCAN4Q969J2 545 aaPredicted RBP27.32■■□□□ 1.96
PABPN1-206ENST00000556809 OPTNQ96CV9 577 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 LNPKQ9C0E8 428 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 BOLA2Q9H3K6 86 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 CSADQ9Y600 493 aa27.32■■□□□ 1.96
PABPN1-206ENST00000556809 COL2A1P02458 1487 aaPredicted RBP27.32■■□□□ 1.96
PABPN1-206ENST00000556809 BAG3O95817 575 aa27.31■■□□□ 1.96
PABPN1-206ENST00000556809 TMED8Q6PL24 325 aaPredicted RBP27.31■■□□□ 1.96
PABPN1-206ENST00000556809 CHD1LQ86WJ1 897 aa27.31■■□□□ 1.96
PABPN1-206ENST00000556809 CNKSR2Q8WXI2 1034 aa27.31■■□□□ 1.96
PABPN1-206ENST00000556809 DNAJC2Q99543 621 aaKnown RBP27.31■■□□□ 1.96
PABPN1-206ENST00000556809 TTC41PQ6P2S7 1318 aa27.31■■□□□ 1.96
PABPN1-206ENST00000556809 CASP8AP2Q9UKL3 1982 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 MX1P20591 662 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 INPP5BP32019 993 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 INHBEP58166 350 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 TTF1Q15361 905 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-206ENST00000556809 TSHZ3Q63HK5 1081 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 TEX11Q8IYF3 940 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 MAGEB6Q8N7X4 407 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 HAUS7Q99871 368 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 NOL10Q9BSC4 688 aaKnown RBP27.3■■□□□ 1.96
PABPN1-206ENST00000556809 SALL3Q9BXA9 1300 aa27.3■■□□□ 1.96
PABPN1-206ENST00000556809 TESPA1A2RU30 521 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-206ENST00000556809 SPDYE5A6NIY4 337 aa27.29■■□□□ 1.96
PABPN1-206ENST00000556809 PLCG2P16885 1265 aa27.29■■□□□ 1.96
PABPN1-206ENST00000556809 CYP7A1P22680 504 aa27.29■■□□□ 1.96
PABPN1-206ENST00000556809 MAP3K12Q12852 859 aa27.29■■□□□ 1.96
PABPN1-206ENST00000556809 OSBPL5Q9H0X9 879 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-206ENST00000556809 PHF20L1A8MW92 1017 aa27.28■■□□□ 1.96
PABPN1-206ENST00000556809 ZSCAN29Q8IWY8 852 aaPredicted RBP27.28■■□□□ 1.96
PABPN1-206ENST00000556809 MS4A4AQ96JQ5 239 aa27.28■■□□□ 1.96
PABPN1-206ENST00000556809 GOLIM4O00461 696 aa27.27■■□□□ 1.96
PABPN1-206ENST00000556809 SLURP2P0DP57 97 aa27.27■■□□□ 1.96
PABPN1-206ENST00000556809 DYNLL1P63167 89 aaKnown RBP27.27■■□□□ 1.96
PABPN1-206ENST00000556809 ERO1BQ86YB8 467 aa27.27■■□□□ 1.96
PABPN1-206ENST00000556809 EDC3Q96F86 508 aaKnown RBP27.27■■□□□ 1.96
PABPN1-206ENST00000556809 CFHR5Q9BXR6 569 aa27.27■■□□□ 1.96
PABPN1-206ENST00000556809 PAG1Q9NWQ8 432 aa27.27■■□□□ 1.96
PABPN1-206ENST00000556809 SIPA1L1O43166 1804 aa27.26■■□□□ 1.95
PABPN1-206ENST00000556809 ERC2O15083 957 aa27.26■■□□□ 1.95
PABPN1-206ENST00000556809 NOL9Q5SY16 702 aaKnown RBP27.26■■□□□ 1.95
PABPN1-206ENST00000556809 IFNL1Q8IU54 200 aa27.26■■□□□ 1.95
PABPN1-206ENST00000556809 IGF2BP3O00425 579 aaKnown RBP eCLIP27.25■■□□□ 1.95
PABPN1-206ENST00000556809 TBC1D12O60347 775 aa27.25■■□□□ 1.95
PABPN1-206ENST00000556809 TNS4Q8IZW8 715 aa27.25■■□□□ 1.95
PABPN1-206ENST00000556809 PI4K2BQ8TCG2 481 aa27.25■■□□□ 1.95
PABPN1-206ENST00000556809 OTUD5Q96G74 571 aa27.25■■□□□ 1.95
PABPN1-206ENST00000556809 PTPN18Q99952 460 aa27.25■■□□□ 1.95
PABPN1-206ENST00000556809 GLRX3O76003 335 aaKnown RBP27.24■■□□□ 1.95
PABPN1-206ENST00000556809 PDE6AP16499 860 aa27.24■■□□□ 1.95
PABPN1-206ENST00000556809 MIGA1Q8NAN2 632 aa27.24■■□□□ 1.95
PABPN1-206ENST00000556809 TGFBRAP1Q8WUH2 860 aa27.24■■□□□ 1.95
PABPN1-206ENST00000556809 STAP2Q9UGK3 403 aa27.24■■□□□ 1.95
PABPN1-206ENST00000556809 FLT1P17948 1338 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 TCRBV5S4A2TA0A5A2 114 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 TBC1D8O95759 1140 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 PDE1AP54750 535 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 PPATQ06203 517 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 PPIL2Q13356 520 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 SLC9C2Q5TAH2 1124 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 CERS3Q8IU89 383 aa27.23■■□□□ 1.95
PABPN1-206ENST00000556809 RIOK1Q9BRS2 568 aaKnown RBP27.23■■□□□ 1.95
PABPN1-206ENST00000556809 IRF6O14896 467 aa27.22■■□□□ 1.95
PABPN1-206ENST00000556809 ALDH1A1P00352 501 aa27.22■■□□□ 1.95
PABPN1-206ENST00000556809 MAPKAPK5Q8IW41 473 aa27.22■■□□□ 1.95
PABPN1-206ENST00000556809 MYH7P12883 1935 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms