RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 MIGA2Q7L4E1 593 aa21.41■■□□□ 1.02
TUBB3-212ENST00000556565 SH3BP5LQ7L8J4 393 aa21.41■■□□□ 1.02
TUBB3-212ENST00000556565 TEX11Q8IYF3 940 aa21.41■■□□□ 1.02
TUBB3-212ENST00000556565 SH3RF3Q8TEJ3 882 aaPredicted RBP21.41■■□□□ 1.02
TUBB3-212ENST00000556565 DNAJC2Q99543 621 aaKnown RBP21.41■■□□□ 1.02
TUBB3-212ENST00000556565 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
TUBB3-212ENST00000556565 AATFQ9NY61 560 aaKnown RBP eCLIP21.41■■□□□ 1.02
TUBB3-212ENST00000556565 ATP5JP18859 108 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 CYP7A1P22680 504 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 PPP4CP60510 307 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 MAP3K12Q12852 859 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 TTF1Q15361 905 aaPredicted RBP21.4■■□□□ 1.02
TUBB3-212ENST00000556565 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
TUBB3-212ENST00000556565 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 OPTNQ96CV9 577 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 SNCAIPQ9Y6H5 919 aa21.4■■□□□ 1.02
TUBB3-212ENST00000556565 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
TUBB3-212ENST00000556565 LAMB1P07942 1786 aa21.39■■□□□ 1.01
TUBB3-212ENST00000556565 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-212ENST00000556565 MANSC4A6NHS7 340 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-212ENST00000556565 GOLIM4O00461 696 aa21.39■■□□□ 1.01
TUBB3-212ENST00000556565 PLCG2P16885 1265 aa21.39■■□□□ 1.01
TUBB3-212ENST00000556565 TM4SF4P48230 202 aa21.39■■□□□ 1.01
TUBB3-212ENST00000556565 TMED8Q6PL24 325 aaPredicted RBP21.39■■□□□ 1.01
TUBB3-212ENST00000556565 AK9Q5TCS8 1911 aa21.39■■□□□ 1.01
TUBB3-212ENST00000556565 TRPA1O75762 1119 aa21.38■■□□□ 1.01
TUBB3-212ENST00000556565 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
TUBB3-212ENST00000556565 ZKSCAN4Q969J2 545 aaPredicted RBP21.38■■□□□ 1.01
TUBB3-212ENST00000556565 OSBPL5Q9H0X9 879 aaPredicted RBP21.38■■□□□ 1.01
TUBB3-212ENST00000556565 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
TUBB3-212ENST00000556565 SPDYE5A6NIY4 337 aa21.37■■□□□ 1.01
TUBB3-212ENST00000556565 INPP5BP32019 993 aa21.37■■□□□ 1.01
TUBB3-212ENST00000556565 AAMPQ13685 434 aa21.37■■□□□ 1.01
TUBB3-212ENST00000556565 EDC3Q96F86 508 aaKnown RBP21.37■■□□□ 1.01
TUBB3-212ENST00000556565 HAUS7Q99871 368 aa21.37■■□□□ 1.01
TUBB3-212ENST00000556565 ZNF112Q9UJU3 913 aa21.37■■□□□ 1.01
TUBB3-212ENST00000556565 PDE6AP16499 860 aa21.36■■□□□ 1.01
TUBB3-212ENST00000556565 DYNLL1P63167 89 aaKnown RBP21.36■■□□□ 1.01
TUBB3-212ENST00000556565 MIGA1Q8NAN2 632 aa21.36■■□□□ 1.01
TUBB3-212ENST00000556565 OTUD5Q96G74 571 aa21.36■■□□□ 1.01
TUBB3-212ENST00000556565 ECHDC1Q9NTX5 307 aa21.36■■□□□ 1.01
TUBB3-212ENST00000556565 PAG1Q9NWQ8 432 aa21.36■■□□□ 1.01
TUBB3-212ENST00000556565 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
TUBB3-212ENST00000556565 HDAC1Q13547 482 aaPredicted RBP21.35■■□□□ 1.01
TUBB3-212ENST00000556565 CERS3Q8IU89 383 aa21.35■■□□□ 1.01
TUBB3-212ENST00000556565 GPATCH3Q96I76 525 aa21.35■■□□□ 1.01
TUBB3-212ENST00000556565 FLT1P17948 1338 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 INHBEP58166 350 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 MAP3K10Q02779 954 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 NOL9Q5SY16 702 aaKnown RBP21.34■■□□□ 1.01
TUBB3-212ENST00000556565 SLC9C2Q5TAH2 1124 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 ERO1BQ86YB8 467 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 MAPKAPK5Q8IW41 473 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 EXOC6Q8TAG9 804 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 TGFBRAP1Q8WUH2 860 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 CDK5RAP2Q96SN8 1893 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 FOCADQ5VW36 1801 aa21.34■■□□□ 1.01
TUBB3-212ENST00000556565 SLURP2P0DP57 97 aa21.33■■□□□ 1.01
TUBB3-212ENST00000556565 IFNL1Q8IU54 200 aa21.33■■□□□ 1.01
TUBB3-212ENST00000556565 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
TUBB3-212ENST00000556565 ZNF532Q9HCE3 1301 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 TCRBV5S4A2TA0A5A2 114 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 TESPA1A2RU30 521 aaPredicted RBP21.32■■□□□ 1
TUBB3-212ENST00000556565 PHF20L1A8MW92 1017 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 IGF2BP3O00425 579 aaKnown RBP eCLIP21.32■■□□□ 1
TUBB3-212ENST00000556565 PPIL2Q13356 520 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 TSHZ3Q63HK5 1081 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 MS4A4AQ96JQ5 239 aa21.32■■□□□ 1
TUBB3-212ENST00000556565 FAM196BA6NMK8 535 aa21.31■■□□□ 1
TUBB3-212ENST00000556565 TBC1D12O60347 775 aa21.31■■□□□ 1
TUBB3-212ENST00000556565 ALDH1A1P00352 501 aa21.31■■□□□ 1
TUBB3-212ENST00000556565 GTF2A2P52657 109 aa21.31■■□□□ 1
TUBB3-212ENST00000556565 RIOK1Q9BRS2 568 aaKnown RBP21.31■■□□□ 1
TUBB3-212ENST00000556565 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
TUBB3-212ENST00000556565 MAGEB6P1A0A0J9YX57 407 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 IRF6O14896 467 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 TBC1D8O95759 1140 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 ADD2P35612 726 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 PPATQ06203 517 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 SCYL3Q8IZE3 742 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 OTUD7AQ8TE49 926 aaPredicted RBP21.3■■□□□ 1
TUBB3-212ENST00000556565 BRI3BPQ8WY22 251 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 GCC1Q96CN9 775 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 CFHR5Q9BXR6 569 aa21.3■■□□□ 1
TUBB3-212ENST00000556565 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.3■■□□□ 1
TUBB3-212ENST00000556565 SIPA1L1O43166 1804 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 CCL15-CCL14A0A0B4J2E2 113 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 USP5P45974 858 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 CCL15Q16663 113 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 PTPN18Q99952 460 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.29■■□□□ 13e-6■■■■■ 29.3
TUBB3-212ENST00000556565 SAP30BPQ9UHR5 308 aaKnown RBP21.29■■□□□ 1
TUBB3-212ENST00000556565 HERC5Q9UII4 1024 aaKnown RBP21.29■■□□□ 1
TUBB3-212ENST00000556565 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
TUBB3-212ENST00000556565 DOCK1Q14185 1865 aa21.28■■□□□ 1
TUBB3-212ENST00000556565 SNAPC2Q13487 334 aa21.28■■□□□ 1
TUBB3-212ENST00000556565 PICK1Q9NRD5 415 aa21.28■■□□□ 1
TUBB3-212ENST00000556565 PI4KBQ9UBF8 816 aa21.28■■□□□ 1
TUBB3-212ENST00000556565 ZBTB47Q9UFB7 747 aaPredicted RBP21.28■■□□□ 1
TUBB3-212ENST00000556565 PALD1Q9ULE6 856 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms