RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
HNRNPC-225ENST00000556513 RGS3P49796 1198 aa12.61□□□□□ -0.39
HNRNPC-225ENST00000556513 PICALMQ13492 652 aa12.61□□□□□ -0.39
HNRNPC-225ENST00000556513 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
HNRNPC-225ENST00000556513 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
HNRNPC-225ENST00000556513 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 MYH7P12883 1935 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 GJA5P36382 358 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 GSTO1P78417 241 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 VGLL4Q14135 290 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 CLASRPQ8N2M8 674 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.392e-14■□□□□ 9.1
HNRNPC-225ENST00000556513 ZKSCAN4Q969J2 545 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
HNRNPC-225ENST00000556513 MYH1P12882 1939 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 UNCXA6NJT0 531 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 CAPN15O75808 1086 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 LDHCP07864 332 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 ZBTB48P10074 688 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 SREBF2Q12772 1141 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 NAA16Q6N069 864 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 ZSCAN29Q8IWY8 852 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 HOOK2Q96ED9 719 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 DDX4Q9NQI0 724 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 CSADQ9Y600 493 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
HNRNPC-225ENST00000556513 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 TM4SF4P48230 202 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 RHBDL3P58872 404 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 ANTXR1Q9H6X2 564 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 UPF2Q9HAU5 1272 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 DOCK1Q14185 1865 aa12.58□□□□□ -0.4
HNRNPC-225ENST00000556513 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 ENTPD3O75355 529 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 IDH1O75874 414 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SLURP2P0DP57 97 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 INPP5BP32019 993 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 NUCB1Q02818 461 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 AATFQ9NY61 560 aaKnown RBP eCLIP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
HNRNPC-225ENST00000556513 SIPA1L1O43166 1804 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 DDTLA6NHG4 134 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 TEX11Q8IYF3 940 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 PHIPQ8WWQ0 1821 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 PTPRFP10586 1907 aa12.56□□□□□ -0.4
HNRNPC-225ENST00000556513 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
HNRNPC-225ENST00000556513 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
HNRNPC-225ENST00000556513 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-225ENST00000556513 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 BAG3O95817 575 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 CYP7A1P22680 504 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 INHBEP58166 350 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 NAV1Q8NEY1 1877 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 GOLIM4O00461 696 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 ERO1BQ86YB8 467 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 TGFBRAP1Q8WUH2 860 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 PTPN18Q99952 460 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 OSBPL5Q9H0X9 879 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
HNRNPC-225ENST00000556513 CENPFP49454 3210 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms