RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 SIL1Q9H173 461 aa12.12□□□□□ -0.47
SRSF5-212ENST00000556184 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.12□□□□□ -0.47
SRSF5-212ENST00000556184 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
SRSF5-212ENST00000556184 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
SRSF5-212ENST00000556184 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
SRSF5-212ENST00000556184 E7EWF7 191 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 CORO7P57737 925 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 TEFQ10587 303 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 DDX21Q9NR30 783 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRSF5-212ENST00000556184 CDC23Q9UJX2 597 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ZNF18P17022 549 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
SRSF5-212ENST00000556184 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 DHX58Q96C10 678 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ACBD3Q9H3P7 528 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ANKZF1Q9H8Y5 726 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 VIPAS39Q9H9C1 493 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ARHGAP23Q9P227 1491 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
SRSF5-212ENST00000556184 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
SRSF5-212ENST00000556184 BIN1O00499 593 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 CCDC175P0C221 793 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 IFNL1Q8IU54 200 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 SUGP1Q8IWZ8 645 aaKnown RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 ENOX1Q8TC92 643 aaKnown RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 EPC1Q9H2F5 836 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 KCNQ3O43525 872 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 TTC31Q49AM3 519 aaPredicted RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 MLKLQ8NB16 471 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 SEC62Q99442 399 aaKnown RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 DACH1Q9UI36 760 aa12.1□□□□□ -0.47
SRSF5-212ENST00000556184 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
SRSF5-212ENST00000556184 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 RESP18Q5W5W9 173 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 IP6K1Q92551 441 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 NCOA5Q9HCD5 579 aaKnown RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 VPS18Q9P253 973 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 EIF3CLB5ME19 914 aaKnown RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 ANXA1P04083 346 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 PLEKHO1Q53GL0 409 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 WDR93Q6P2C0 686 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 ADAMTS19Q8TE59 1207 aa12.09□□□□□ -0.47
SRSF5-212ENST00000556184 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 EIF3CQ99613 913 aaKnown RBP12.09□□□□□ -0.47
SRSF5-212ENST00000556184 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 AARSP49588 968 aaKnown RBP eCLIP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 PTPN12Q05209 780 aaKnown RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 GCKRQ14397 625 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 NR1I3Q14994 352 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 EFCAB13Q8IY85 973 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 KIF5CO60282 957 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 MDM2Q00987 491 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 HSP90B2PQ58FF3 399 aa12.08□□□□□ -0.48
SRSF5-212ENST00000556184 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 LTV1Q96GA3 475 aaPredicted RBP12.08□□□□□ -0.48
SRSF5-212ENST00000556184 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
SRSF5-212ENST00000556184 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 PTPAQ15257 358 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
SRSF5-212ENST00000556184 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 NCAPGQ9BPX3 1015 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
SRSF5-212ENST00000556184 AKR1B15C9JRZ8 316 aaPredicted RBP12.07□□□□□ -0.48
SRSF5-212ENST00000556184 MCM3P25205 808 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms