RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CYP4F12Q9HCS2 524 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 INPP5FQ9Y2H2 1132 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 SNCAIPQ9Y6H5 919 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 TIAF1O95411 115 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 APBA3O96018 575 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 CRKP46108 304 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 RING1Q06587 406 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 COL9A2Q14055 689 aaPredicted RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 ADGRE1Q14246 886 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 ZC3H12AQ5D1E8 599 aaKnown RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 JARID2Q92833 1246 aaPredicted RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 AKTIPQ9H8T0 292 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 CAPN10Q9HC96 672 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 UBP1Q9NZI7 540 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 PCDHA4Q9UN74 947 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 TACC3Q9Y6A5 838 aa5.38□□□□□ -1.55
SRP54-209ENST00000555746 THOC2Q8NI27 1593 aaKnown RBP5.38□□□□□ -1.55
SRP54-209ENST00000555746 GFRA2O00451 464 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 TMPRSS2O15393 492 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 ADH5P11766 374 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 ERVK-24P63145 666 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 APOBRQ0VD83 1088 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 INPP5AQ14642 412 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 MBTPS1Q14703 1052 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 ANKRD34AQ69YU3 496 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 CYB5RLQ6IPT4 315 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 SEC16BQ96JE7 1060 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 RAD18Q9NS91 495 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 CRIM1Q9NZV1 1036 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 USP21Q9UK80 565 aa5.37□□□□□ -1.55
SRP54-209ENST00000555746 BAZ1AQ9NRL2 1556 aaPredicted RBP5.37□□□□□ -1.55
SRP54-209ENST00000555746 BPNT1O95861 308 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 ATF4P18848 351 aaPredicted RBP5.36□□□□□ -1.55
SRP54-209ENST00000555746 NOS3P29474 1203 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 SOX9P48436 509 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 ID3Q02535 119 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 SOX4Q06945 474 aaPredicted RBP5.36□□□□□ -1.55
SRP54-209ENST00000555746 KCNMA1Q12791 1236 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 CWF19L2Q2TBE0 894 aaKnown RBP5.36□□□□□ -1.55
SRP54-209ENST00000555746 WIPI1Q5MNZ9 446 aaPredicted RBP5.36□□□□□ -1.55
SRP54-209ENST00000555746 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 CYFIP1Q7L576 1253 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 HDXQ7Z353 690 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 REXO1Q8N1G1 1221 aaKnown RBP5.36□□□□□ -1.55
SRP54-209ENST00000555746 AGGF1Q8N302 714 aaeCLIP5.36□□□□□ -1.55
SRP54-209ENST00000555746 WFDC12Q8WWY7 111 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 NKD1Q969G9 470 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 PLPPR2Q96GM1 343 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 DCAF5Q96JK2 942 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 CEP41Q9BYV8 373 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 PPP1R9AQ9ULJ8 1098 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 PRR36Q9H6K5 1346 aa5.36□□□□□ -1.55
SRP54-209ENST00000555746 ARHGEF11O15085 1522 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 KRBA1A5PL33 1030 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 ALX3O95076 343 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 CDK8P49336 464 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 GSK3AP49840 483 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 AKAP4Q5JQC9 854 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 FDX2Q6P4F2 183 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 VPS37DQ86XT2 251 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 DZIP1LQ8IYY4 767 aaKnown RBP5.35□□□□□ -1.55
SRP54-209ENST00000555746 C2CD4AQ8NCU7 369 aaPredicted RBP5.35□□□□□ -1.55
SRP54-209ENST00000555746 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
SRP54-209ENST00000555746 POLR3KQ9Y2Y1 108 aaPredicted RBP5.35□□□□□ -1.55
SRP54-209ENST00000555746 DCDC2CA8MYV0 355 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 FANCGO15287 622 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
SRP54-209ENST00000555746 ATE1O95260 518 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 FGRP09769 529 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 NTF4P34130 210 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 CHRNA4P43681 627 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 PREPP48147 710 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 ARID5AQ03989 594 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 SF3A1Q15459 793 aaKnown RBP5.34□□□□□ -1.55
SRP54-209ENST00000555746 UVSSAQ2YD98 709 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 SEZ6Q53EL9 994 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 TXNRD3Q86VQ6 643 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 C12orf50Q8NA57 414 aaPredicted RBP5.34□□□□□ -1.55
SRP54-209ENST00000555746 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 SREK1Q8WXA9 508 aaKnown RBP5.34□□□□□ -1.55
SRP54-209ENST00000555746 ELMO3Q96BJ8 720 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
SRP54-209ENST00000555746 ATXN3LQ9H3M9 355 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 EHMT1Q9H9B1 1298 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 DISC1Q9NRI5 854 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 GINM1Q9NU53 330 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 HIF3AQ9Y2N7 669 aa5.34□□□□□ -1.55
SRP54-209ENST00000555746 DRD2P14416 443 aa5.33□□□□□ -1.56
SRP54-209ENST00000555746 IREB2P48200 963 aaKnown RBP5.33□□□□□ -1.56
SRP54-209ENST00000555746 ZNF165P49910 485 aa5.33□□□□□ -1.56
SRP54-209ENST00000555746 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
SRP54-209ENST00000555746 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms