RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ITGAEP38570 1179 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 RPS26P62854 115 aaKnown RBP5.27□□□□□ -1.57
SCFD1-213ENST00000554776 ERVK-24P63145 666 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 MAP7Q14244 749 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-213ENST00000554776 NFKBIBQ15653 356 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 TTBK2Q6IQ55 1244 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 SEZ6L2Q6UXD5 910 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 SHKBP1Q8TBC3 707 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 ACSBG1Q96GR2 724 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 MFSD14AQ96MC6 490 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 PRKAG2Q9UGJ0 569 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 PRR19A6NJB7 356 aa5.26□□□□□ -1.57
SCFD1-213ENST00000554776 GATA6Q92908 595 aa5.26□□□□□ -1.57
SCFD1-213ENST00000554776 GAL3ST3Q96A11 431 aa5.26□□□□□ -1.57
SCFD1-213ENST00000554776 NOC4LQ9BVI4 516 aaKnown RBP5.26□□□□□ -1.57
SCFD1-213ENST00000554776 DYNC1LI2O43237 492 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-213ENST00000554776 TGFB1P01137 390 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 F13BP05160 661 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 NEFMP07197 916 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 VAMP1P23763 118 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 ADMP35318 185 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 LIG3P49916 1009 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 RING1Q06587 406 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 LRP8Q14114 963 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 TTLL4Q14679 1199 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 AGMOQ6ZNB7 445 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 ZAR1Q86SH2 424 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 Q8N3U1 123 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 RNF214Q8ND24 703 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 PIDD1Q9HB75 910 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 C1GALT1Q9NS00 363 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 KIAA1522Q9P206 1035 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-213ENST00000554776 DAGLAQ9Y4D2 1042 aa5.25□□□□□ -1.57
SCFD1-213ENST00000554776 WDR64B1ANS9 1081 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 RECKO95980 971 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 RLBP1P12271 317 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 HCLS1P14317 486 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-213ENST00000554776 NTF4P34130 210 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 PTPN11Q06124 597 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-213ENST00000554776 CPSF6Q16630 551 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCFD1-213ENST00000554776 ARTNQ5T4W7 220 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-213ENST00000554776 SHISA5Q8N114 240 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 GIMAP7Q8NHV1 300 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 TBC1D32Q96NH3 1257 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 BCL11AQ9H165 835 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 PCDHA4Q9UN74 947 aa5.24□□□□□ -1.57
SCFD1-213ENST00000554776 SCO2A0A1W2PP80 73 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 DCDC2CA8MYV0 355 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 TFE3P19532 575 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-213ENST00000554776 CD97P48960 835 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 FBXL6Q8N531 539 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 ISL2Q96A47 359 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 MRRFQ96E11 262 aaKnown RBP5.23□□□□□ -1.57
SCFD1-213ENST00000554776 BACH2Q9BYV9 841 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 ATG3Q9NT62 314 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 PCOLCE2Q9UKZ9 415 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 PCDHB5Q9Y5E4 795 aa5.23□□□□□ -1.57
SCFD1-213ENST00000554776 KIAA1324LA8MWY0 1029 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 FANCGO15287 622 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 HYAL3O43820 417 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 RNGTTO60942 597 aaKnown RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 COBLO75128 1261 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 SEPT6Q14141 434 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 INPP5AQ14642 412 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 PPM1JQ5JR12 505 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 ZBTB37Q5TC79 503 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 INTS5Q6P9B9 1019 aaKnown RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 LRFN4Q6PJG9 635 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 CYFIP1Q7L576 1253 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 C12orf40Q86WS4 652 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 PHC3Q8NDX5 983 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 ELMO3Q96BJ8 720 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 METTL22Q9BUU2 404 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-213ENST00000554776 OSBPL1AQ9BXW6 950 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 LGR6Q9HBX8 967 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 ZFP64Q9NPA5 681 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 PIM2Q9P1W9 311 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 CSADQ9Y600 493 aa5.22□□□□□ -1.57
SCFD1-213ENST00000554776 FAM170BA6NMN3 283 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 MED26O95402 600 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 LMNB1P20700 586 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 SSTR4P31391 388 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 GRIK1P39086 918 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 CYP27A1Q02318 531 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 OGFOD3Q6PK18 319 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 ERMP1Q7Z2K6 904 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 HDXQ7Z353 690 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 PLPPR2Q96GM1 343 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 PSMG3-AS1Q96PY0 264 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 RSRP1Q9BUV0 290 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 MIR1-1HGQ9H1L0 117 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 TLR6Q9Y2C9 796 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 LEMD3Q9Y2U8 911 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 SNCAIPQ9Y6H5 919 aa5.21□□□□□ -1.58
SCFD1-213ENST00000554776 FOSL1P15407 271 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 SPINK2P20155 84 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms