RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 PDE4DIPQ5VU43 2346 aa13.2□□□□□ -0.3
PNN-203ENST00000554117 TLR2O60603 784 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 PLCG2P16885 1265 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 PRMT2P55345 433 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
PNN-203ENST00000554117 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
PNN-203ENST00000554117 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
PNN-203ENST00000554117 PTPN18Q99952 460 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 IDI2Q9BXS1 227 aa13.19□□□□□ -0.3
PNN-203ENST00000554117 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
PNN-203ENST00000554117 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 GAKO14976 1311 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 IGSF3O75054 1194 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
PNN-203ENST00000554117 INPP5BP32019 993 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 MECOMQ03112 1051 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
PNN-203ENST00000554117 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 FAM43AQ8N2R8 423 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
PNN-203ENST00000554117 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
PNN-203ENST00000554117 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 BTBD19C9JJ37 291 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 CXCL11O14625 94 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
PNN-203ENST00000554117 NFIAQ12857 509 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 SLC4A8Q2Y0W8 1093 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 MIER1Q8N108 512 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
PNN-203ENST00000554117 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
PNN-203ENST00000554117 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
PNN-203ENST00000554117 SIPA1L1O43166 1804 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 PDHXO00330 501 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 CTNND1O60716 968 aaKnown RBP13.16□□□□□ -0.3
PNN-203ENST00000554117 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
PNN-203ENST00000554117 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
PNN-203ENST00000554117 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 HMG20BQ9P0W2 317 aa13.16□□□□□ -0.3
PNN-203ENST00000554117 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 LACTBP83111 547 aaPredicted RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
PNN-203ENST00000554117 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
PNN-203ENST00000554117 HMMRO75330 724 aa13.14□□□□□ -0.31
PNN-203ENST00000554117 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
PNN-203ENST00000554117 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
PNN-203ENST00000554117 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
PNN-203ENST00000554117 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
PNN-203ENST00000554117 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
PNN-203ENST00000554117 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
PNN-203ENST00000554117 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
PNN-203ENST00000554117 ATRNL1Q5VV63 1379 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 TBC1D12O60347 775 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 MCAMP43121 646 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 FCGRTP55899 365 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 POLA2Q14181 598 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
PNN-203ENST00000554117 CPA4Q9UI42 421 aa13.13□□□□□ -0.31
PNN-203ENST00000554117 RFX7Q2KHR2 1363 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 PTPRAP18433 802 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 PSMC4P43686 418 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 UBXN2AP68543 259 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
PNN-203ENST00000554117 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
PNN-203ENST00000554117 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 PTCH2Q9Y6C5 1203 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 MYPNQ86TC9 1320 aa13.12□□□□□ -0.31
PNN-203ENST00000554117 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
PNN-203ENST00000554117 A0A0G2JLL6 359 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms