RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 IMPDH2P12268 514 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 MAGEA8P43361 318 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 RALGDSQ12967 914 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 IFIT2P09913 472 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 TBL3Q12788 808 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 MKL2Q9ULH7 1088 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 RARSP54136 660 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 GUCA1BQ9UMX6 200 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 DAAM1Q9Y4D1 1078 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 TBCAO75347 108 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ARL1P40616 181 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ICA1Q05084 483 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ZSCAN22P10073 491 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 FERP16591 822 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 KIAA0753Q2KHM9 967 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 FAXDC2Q96IV6 333 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 H3BQF6 201 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 CARD9Q9H257 536 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 DIS3Q9Y2L1 958 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 CBX3Q13185 183 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 P3H1Q32P28 736 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 DRAXINQ8NBI3 349 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 SH3GL1Q99961 368 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
GTF2A1-203ENST00000553612 TLDC2A0PJX2 215 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 H0Y3Z8 333 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 NFKBIAP25963 317 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 BTN2A1Q7KYR7 527 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 RUFY2Q8WXA3 655 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 XAB2Q9HCS7 855 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 IL16Q14005 1332 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 EHBP1Q8NDI1 1231 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 DESI2Q9BSY9 194 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 SRCIN1Q9C0H9 1055 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 CYP11B2P19099 503 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 CETN2P41208 172 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 MAIP1Q8WWC4 291 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 STXBP3O00186 592 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 TMCC1O94876 653 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 PIP4K2BP78356 416 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 CCSAPQ6IQ19 270 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 CEP295NLQ96MC4 621 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 WDR46O15213 610 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 TSPAN9O75954 239 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 TAF12Q16514 161 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 ZNF394Q53GI3 561 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 PLEKHG4BQ96PX9 1271 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 NUP155O75694 1391 aa10.04□□□□□ -0.8
GTF2A1-203ENST00000553612 MRPS25P82663 173 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ARHGEF2Q92974 986 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 LBHD1Q9BQE6 289 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 KAT14Q9H8E8 782 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 DLGAP2Q9P1A6 1054 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ARPC4P59998 168 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ETF1P62495 437 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ZBED6P86452 979 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 KCTD21Q4G0X4 260 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 ZC3H18Q86VM9 953 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 KCNB2Q92953 911 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 LRPPRCP42704 1394 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 N4BP3O15049 544 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 KRT75O95678 551 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 SERPINB4P48594 390 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 VPS53Q5VIR6 699 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 IQCF2Q8IXL9 164 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 STAMBPL1Q96FJ0 436 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 RIN2Q8WYP3 895 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 SLC39A3Q9BRY0 314 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 SUGCTQ9HAC7 445 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 GALNT8Q9NY28 637 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms