RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 PPP4CP60510 307 aa13.2□□□□□ -0.3
CNOT2-239ENST00000552483 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
CNOT2-239ENST00000552483 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-239ENST00000552483 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
CNOT2-239ENST00000552483 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
CNOT2-239ENST00000552483 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-239ENST00000552483 BAZ2AQ9UIF9 1905 aaKnown RBP13.19□□□□□ -0.3
CNOT2-239ENST00000552483 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 ENTPD3O75355 529 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 ADD2P35612 726 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 ZNF157P51786 506 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-239ENST00000552483 NUCB1Q02818 461 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
CNOT2-239ENST00000552483 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
CNOT2-239ENST00000552483 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
CNOT2-239ENST00000552483 IGSF3O75054 1194 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 GJA5P36382 358 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 ECE1P42892 770 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 PDE1AP54750 535 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
CNOT2-239ENST00000552483 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
CNOT2-239ENST00000552483 TGFBRAP1Q8WUH2 860 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
CNOT2-239ENST00000552483 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
CNOT2-239ENST00000552483 FLT1P17948 1338 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 FAM196BA6NMK8 535 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
CNOT2-239ENST00000552483 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
CNOT2-239ENST00000552483 BAG3O95817 575 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 PDE4AP27815 886 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 MKRN3Q13064 507 aaKnown RBP13.17□□□□□ -0.3
CNOT2-239ENST00000552483 LCORLQ8N3X6 602 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
CNOT2-239ENST00000552483 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
CNOT2-239ENST00000552483 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
CNOT2-239ENST00000552483 HSPA1AP0DMV8 641 aaKnown RBP13.16□□□□□ -0.3
CNOT2-239ENST00000552483 HSPA1BP0DMV9 641 aaKnown RBP13.16□□□□□ -0.3
CNOT2-239ENST00000552483 INPP5BP32019 993 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 IREB2P48200 963 aaKnown RBP13.16□□□□□ -0.3
CNOT2-239ENST00000552483 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
CNOT2-239ENST00000552483 EVX2Q03828 476 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 CSRNP1Q96S65 589 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 ELP3Q9H9T3 547 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 SNCAIPQ9Y6H5 919 aa13.16□□□□□ -0.3
CNOT2-239ENST00000552483 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ERC2O15083 957 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 PRKAB2O43741 272 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 PLCG2P16885 1265 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 VGLL4Q14135 290 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 UBE3CQ15386 1083 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 SLC4A8Q2Y0W8 1093 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-239ENST00000552483 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ZNF341Q9BYN7 854 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 PUS7LQ9H0K6 701 aaKnown RBP13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-239ENST00000552483 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
CNOT2-239ENST00000552483 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 PTPRFP10586 1907 aa13.15□□□□□ -0.3
CNOT2-239ENST00000552483 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 MBD4O95243 580 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 MAP2K2P36507 400 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 NOGQ13253 232 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 RRP1BQ14684 758 aaKnown RBP13.14□□□□□ -0.31
CNOT2-239ENST00000552483 SPRYD7Q5W111 196 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
CNOT2-239ENST00000552483 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
CNOT2-239ENST00000552483 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 M0R2C6 588 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 FOXN1O15353 648 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-239ENST00000552483 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 SLC10A4Q96EP9 437 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
CNOT2-239ENST00000552483 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 9.6
CNOT2-239ENST00000552483 MYH8P13535 1937 aa13.13□□□□□ -0.31
CNOT2-239ENST00000552483 RNF113AO15541 343 aaKnown RBP13.12□□□□□ -0.31
CNOT2-239ENST00000552483 CYP2D6P10635 497 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms