RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
GCN1-208ENST00000551549 DBNDD2Q9BQY9 259 aa11.98□□□□□ -0.49
GCN1-208ENST00000551549 GPR108Q9NPR9 543 aa11.98□□□□□ -0.49
GCN1-208ENST00000551549 RAI14Q9P0K7 980 aa11.98□□□□□ -0.49
GCN1-208ENST00000551549 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
GCN1-208ENST00000551549 MYH13Q9UKX3 1938 aa11.98□□□□□ -0.49
GCN1-208ENST00000551549 ATRNL1Q5VV63 1379 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 DDTLA6NHG4 134 aaPredicted RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 SP3Q02447 781 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 PPATQ06203 517 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 TAF1CQ15572 869 aaPredicted RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 TTC39AQ5SRH9 613 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 NOL9Q5SY16 702 aaKnown RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
GCN1-208ENST00000551549 TLR7Q9NYK1 1049 aaKnown RBP11.97□□□□□ -0.49
GCN1-208ENST00000551549 GSTO1P78417 241 aa11.96□□□□□ -0.49
GCN1-208ENST00000551549 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.49
GCN1-208ENST00000551549 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
GCN1-208ENST00000551549 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
GCN1-208ENST00000551549 LRP2BPQ9P2M1 347 aa11.96□□□□□ -0.49
GCN1-208ENST00000551549 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
GCN1-208ENST00000551549 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
GCN1-208ENST00000551549 LDHCP07864 332 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 MOGSQ13724 837 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
GCN1-208ENST00000551549 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
GCN1-208ENST00000551549 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 PDE4DIPQ5VU43 2346 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
GCN1-208ENST00000551549 PTPRAP18433 802 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 ZAP70P43403 619 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 SCYL3Q8IZE3 742 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
GCN1-208ENST00000551549 ZCCHC17Q9NP64 241 aaKnown RBP11.94□□□□□ -0.5
GCN1-208ENST00000551549 PIH1D3Q9NQM4 214 aaKnown RBP11.94□□□□□ -0.5
GCN1-208ENST00000551549 PICK1Q9NRD5 415 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
GCN1-208ENST00000551549 LAMB1P07942 1786 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 PDHXO00330 501 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 TLR2O60603 784 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
GCN1-208ENST00000551549 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
GCN1-208ENST00000551549 ANKRD23Q86SG2 305 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 ARHGAP39Q9C0H5 1083 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
GCN1-208ENST00000551549 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 ZHX2Q9Y6X8 837 aa11.93□□□□□ -0.5
GCN1-208ENST00000551549 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 CXCL11O14625 94 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
GCN1-208ENST00000551549 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
GCN1-208ENST00000551549 MS4A1P11836 297 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 GPAT2Q6NUI2 795 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
GCN1-208ENST00000551549 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
GCN1-208ENST00000551549 AATFQ9NY61 560 aaKnown RBP eCLIP11.92□□□□□ -0.5
GCN1-208ENST00000551549 CPA4Q9UI42 421 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 RCAN3Q9UKA8 241 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 AFG3L2Q9Y4W6 797 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
GCN1-208ENST00000551549 KIAA0100Q14667 2235 aaKnown RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 TBC1D12O60347 775 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 PPP4CP60510 307 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 C17orf99Q6UX52 265 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 AACSQ86V21 672 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 ERC1Q8IUD2 1116 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 NOL10Q9BSC4 688 aaKnown RBP11.91□□□□□ -0.5
GCN1-208ENST00000551549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
GCN1-208ENST00000551549 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
GCN1-208ENST00000551549 TRIM75PA6NK02 468 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 APBB1O00213 710 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 BAG3O95817 575 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 CYP2C8P10632 490 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 DYNLL1P63167 89 aaKnown RBP11.9□□□□□ -0.5
GCN1-208ENST00000551549 MAPKAPK5Q8IW41 473 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 TGFBRAP1Q8WUH2 860 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 ARMC5Q96C12 935 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 ANTXR1Q9H6X2 564 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
GCN1-208ENST00000551549 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
GCN1-208ENST00000551549 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
GCN1-208ENST00000551549 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms