RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 DIXDC1Q155Q3 683 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 PKN2Q16513 984 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 VPS37DQ86XT2 251 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 ZFPM1Q8IX07 1006 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 ANKRD13AQ8IZ07 590 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 SSH1Q8WYL5 1049 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 RANBP2P49792 3224 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 SZT2Q5T011 3432 aa8.62□□□□□ -1.03
PRPF40B-214ENST00000551320 ZBTB48P10074 688 aaPredicted RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 SP3Q02447 781 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 PTGDRQ13258 359 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 UBE4AQ14139 1066 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 APOBEC3HQ6NTF7 200 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 VGLL2Q8N8G2 317 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 WRNIP1Q96S55 665 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 ADAM33Q9BZ11 813 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 USP44Q9H0E7 712 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 CPA4Q9UI42 421 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 PA2G4Q9UQ80 394 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 SNCAIPQ9Y6H5 919 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 ECM29Q5VYK3 1845 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 TRIOBPQ9H2D6 2365 aa8.61□□□□□ -1.03
PRPF40B-214ENST00000551320 BTBD19C9JJ37 291 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 IRF6O14896 467 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 ALDH1L1O75891 902 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 ADORA1P30542 326 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 NFIAQ12857 509 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 HIC1Q14526 733 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 MTFR1Q15390 333 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 SERPINA10Q9UK55 444 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 PPP2R3BQ9Y5P8 575 aa8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-214ENST00000551320 ALDH1A1P00352 501 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 FECHP22830 423 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 PRDX5P30044 214 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 FKBP1AP62942 108 aaKnown RBP8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 ERO1AQ96HE7 468 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 CSADQ9Y600 493 aa8.59□□□□□ -1.03
PRPF40B-214ENST00000551320 MROH5Q6ZUA9 1318 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 FAM196BA6NMK8 535 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 ST18O60284 1047 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 PDE8BO95263 885 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 CYP2C8P10632 490 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 PHKA1P46020 1223 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 INHBEP58166 350 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 SLC4A8Q2Y0W8 1093 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 RABL6Q3YEC7 729 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 SLC9C1Q4G0N8 1177 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 HABP4Q5JVS0 413 aaKnown RBP8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 ZNF333Q96JL9 665 aa8.58□□□□□ -1.04
PRPF40B-214ENST00000551320 UTYO14607 1347 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 FGFR2P21802 821 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 GTF2A2P52657 109 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 CAVIN4Q5BKX8 364 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 ZFYVE28Q9HCC9 887 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 FAM198AQ9UFP1 575 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 DAGLAQ9Y4D2 1042 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
PRPF40B-214ENST00000551320 H0YGN5 161 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 EYA2O00167 538 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 PDHXO00330 501 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 PEX10O60683 326 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 TNNI2P48788 182 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 MMP14P50281 582 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 TIMM10P62072 90 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 MAP2K5Q13163 448 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 MOGSQ13724 837 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 TNFAIP1Q13829 316 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 PI16Q6UXB8 463 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 ARMC5Q96C12 935 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 ZDHHC15Q96MV8 337 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 SMC4Q9NTJ3 1288 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 NOB1Q9ULX3 412 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms