RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 FAM196BA6NMK8 535 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 CCER2I3L3R5 266 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 SEMA3EO15041 775 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 CYP2C8P10632 490 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 RHBDL3P58872 404 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 MECOMQ03112 1051 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 MTX1Q13505 466 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 HMG20BQ9P0W2 317 aa14.33□□□□□ -0.12
PRPF40B-212ENST00000551111 ZBTB22O15209 634 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 GNAI3P08754 354 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 BTDP43251 543 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 PSMC4P43686 418 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 PICALMQ13492 652 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 MTFR1Q15390 333 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 DZIP1Q86YF9 867 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
PRPF40B-212ENST00000551111 ENTPD3O75355 529 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 PTPRAP18433 802 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 TMEM106CQ9BVX2 250 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 MROH7-TTC4A0A0A0MT08 1334 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
PRPF40B-212ENST00000551111 GPR75-ASB3A0A0A6YYF3 556 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 BCRP11274 1271 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 OSBPP22059 807 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 MCAMP43121 646 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 RRP1BQ14684 758 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 ATF7IPQ6VMQ6 1270 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 TMEM57Q8N5G2 664 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 SRRDQ9UH36 339 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 AFG3L2Q9Y4W6 797 aa14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-212ENST00000551111 A0A0G2JLL6 359 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 CXCL11O14625 94 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 KIF22Q14807 665 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 ARHGEF6Q15052 776 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 PRRT2Q7Z6L0 340 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 NBPF11Q86T75 865 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 ZGPATQ8N5A5 531 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 NSUN4Q96CB9 384 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 SNRKQ9NRH2 765 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 GABRQQ9UN88 632 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
PRPF40B-212ENST00000551111 LOC285556D6RIA3 1793 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 FMNL1O95466 1100 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 GNAI2P04899 355 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 GADL1Q6ZQY3 521 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 SPATA5Q8NB90 893 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 TRIOBPQ9H2D6 2365 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 C1orf115Q9H7X2 142 aa14.28□□□□□ -0.12
PRPF40B-212ENST00000551111 MYH1P12882 1939 aa14.27□□□□□ -0.12
PRPF40B-212ENST00000551111 TRIM75PA6NK02 468 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 ARID4AP29374 1257 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 PRKCZQ05513 592 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 HABP4Q5JVS0 413 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 SPTY2D1Q68D10 685 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 PICK1Q9NRD5 415 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 ALPK3Q96L96 1907 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 PLXNB2O15031 1838 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.13
PRPF40B-212ENST00000551111 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 CTNND1O60716 968 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 RLBP1P12271 317 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 POLA2Q14181 598 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 TREML2Q5T2D2 321 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 GORABQ5T7V8 394 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 SH3RF3Q8TEJ3 882 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 DBNDD2Q9BQY9 259 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 RAI14Q9P0K7 980 aa14.26□□□□□ -0.13
PRPF40B-212ENST00000551111 GNRH1P01148 92 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 GRK4P32298 578 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 JAG1P78504 1218 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
PRPF40B-212ENST00000551111 TBC1D12O60347 775 aa14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 CCL5P13501 91 aa14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 FASTKD5Q7L8L6 764 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 RAET1EQ8TD07 263 aa14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 OSBPL5Q9H0X9 879 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.24□□□□□ -0.13
PRPF40B-212ENST00000551111 H0YGN5 161 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms