RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 CRHR2Q13324 411 aa16.03■□□□□ 0.16
NPAS3-209ENST00000551008 OS9Q13438 667 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
NPAS3-209ENST00000551008 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 CTU1Q7Z7A3 348 aaKnown RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 ZNF512BQ96KM6 892 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 ZNF341Q9BYN7 854 aa16.03■□□□□ 0.16
NPAS3-209ENST00000551008 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 CSADQ9Y600 493 aa16.03■□□□□ 0.16
NPAS3-209ENST00000551008 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 ZAP70P43403 619 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 MAP3K10Q02779 954 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
NPAS3-209ENST00000551008 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.15
NPAS3-209ENST00000551008 IRF6O14896 467 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 PPIL2Q13356 520 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 NOL9Q5SY16 702 aaKnown RBP16.01■□□□□ 0.15
NPAS3-209ENST00000551008 DCAF15Q66K64 600 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 DDX60LQ5H9U9 1706 aaKnown RBP16.01■□□□□ 0.15
NPAS3-209ENST00000551008 MYH1P12882 1939 aa16.01■□□□□ 0.15
NPAS3-209ENST00000551008 CCL15-CCL14A0A0B4J2E2 113 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 FKTNO75072 461 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 MOGSQ13724 837 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 CCL15Q16663 113 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 HOOK2Q96ED9 719 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 RAI14Q9P0K7 980 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 NDUFB9Q9Y6M9 179 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 CENPFP49454 3210 aa16■□□□□ 0.15
NPAS3-209ENST00000551008 MS4A1P11836 297 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 GTF2A2P52657 109 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 PICALMQ13492 652 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 MYH7P12883 1935 aa15.99■□□□□ 0.15
NPAS3-209ENST00000551008 TNRC18O15417 2968 aaPredicted RBP15.99■□□□□ 0.15
NPAS3-209ENST00000551008 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 BTBD19C9JJ37 291 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 RPAP2Q8IXW5 612 aaPredicted RBP15.98■□□□□ 0.15
NPAS3-209ENST00000551008 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 SH3RF3Q8TEJ3 882 aaPredicted RBP15.98■□□□□ 0.15
NPAS3-209ENST00000551008 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
NPAS3-209ENST00000551008 KCNH4Q9UQ05 1017 aa15.98■□□□□ 0.15
NPAS3-209ENST00000551008 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 RGS19P49795 217 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 GSTO1P78417 241 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 PPATQ06203 517 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
NPAS3-209ENST00000551008 AACSQ86V21 672 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.97■□□□□ 0.15
NPAS3-209ENST00000551008 HPS5Q9UPZ3 1129 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 MGAMO43451 1857 aa15.97■□□□□ 0.15
NPAS3-209ENST00000551008 LDHCP07864 332 aa15.96■□□□□ 0.15
NPAS3-209ENST00000551008 PPP4CP60510 307 aa15.96■□□□□ 0.15
NPAS3-209ENST00000551008 NAA16Q6N069 864 aaPredicted RBP15.96■□□□□ 0.15
NPAS3-209ENST00000551008 ERC1Q8IUD2 1116 aa15.96■□□□□ 0.15
NPAS3-209ENST00000551008 CD99L2Q8TCZ2 262 aa15.96■□□□□ 0.15
NPAS3-209ENST00000551008 OSBPL5Q9H0X9 879 aaPredicted RBP15.96■□□□□ 0.15
NPAS3-209ENST00000551008 AATFQ9NY61 560 aaKnown RBP eCLIP15.96■□□□□ 0.15
NPAS3-209ENST00000551008 NAV1Q8NEY1 1877 aa15.96■□□□□ 0.15
NPAS3-209ENST00000551008 ADGRA2Q96PE1 1338 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 RBBP6Q7Z6E9 1792 aaKnown RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 CETPP11597 493 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 DYNLL1P63167 89 aaKnown RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 SNAPC2Q13487 334 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 TAF1CQ15572 869 aaPredicted RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 OTOP1Q7RTM1 612 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
NPAS3-209ENST00000551008 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 SCYL3Q8IZE3 742 aa15.95■□□□□ 0.14
NPAS3-209ENST00000551008 APBB1O00213 710 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 TBC1D12O60347 775 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 OTUD7BQ6GQQ9 843 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 GPAT2Q6NUI2 795 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 FBXO46Q6PJ61 603 aaPredicted RBP15.94■□□□□ 0.14
NPAS3-209ENST00000551008 KIF1BPQ96EK5 621 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 DNAJC18Q9H819 358 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 ZCCHC17Q9NP64 241 aaKnown RBP15.94■□□□□ 0.14
NPAS3-209ENST00000551008 BRCA2P51587 3418 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 KIAA0100Q14667 2235 aaKnown RBP15.94■□□□□ 0.14
NPAS3-209ENST00000551008 FLT1P17948 1338 aa15.94■□□□□ 0.14
NPAS3-209ENST00000551008 PTPRAP18433 802 aa15.93■□□□□ 0.14
NPAS3-209ENST00000551008 PKN2Q16513 984 aaKnown RBP15.93■□□□□ 0.14
NPAS3-209ENST00000551008 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
NPAS3-209ENST00000551008 AFG3L2Q9Y4W6 797 aa15.93■□□□□ 0.14
NPAS3-209ENST00000551008 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 SOX10P56693 466 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms