RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 PTPN11Q06124 597 aaPredicted RBP7.44□□□□□ -1.22
RAB3IP-214ENST00000550847 PCNX4Q63HM2 1172 aa7.44□□□□□ -1.22
RAB3IP-214ENST00000550847 YIPF2Q9BWQ6 316 aa7.44□□□□□ -1.22
RAB3IP-214ENST00000550847 PARP2Q9UGN5 583 aa7.44□□□□□ -1.22
RAB3IP-214ENST00000550847 TTF2Q9UNY4 1162 aaKnown RBP7.44□□□□□ -1.22
RAB3IP-214ENST00000550847 COBLO75128 1261 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 SLFN14P0C7P3 912 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 NTF4P34130 210 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 MAP7Q14244 749 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 LLGL2Q6P1M3 1020 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 EMILIN2Q9BXX0 1053 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 PCMTD2Q9NV79 361 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 SHROOM4Q9ULL8 1493 aa7.43□□□□□ -1.22
RAB3IP-214ENST00000550847 CTSHP09668 335 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 DAB2P98082 770 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 ZNF765Q7L2R6 523 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 OSBPL1AQ9BXW6 950 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 PIM2Q9P1W9 311 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 CSADQ9Y600 493 aa7.42□□□□□ -1.22
RAB3IP-214ENST00000550847 DCDC2CA8MYV0 355 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 TRIM37O94972 964 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 CCDC27Q2M243 656 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 DTX1Q86Y01 620 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 GAL3ST3Q96A11 431 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 ISL2Q96A47 359 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 ACSBG1Q96GR2 724 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 PIDD1Q9HB75 910 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 ATG3Q9NT62 314 aa7.41□□□□□ -1.22
RAB3IP-214ENST00000550847 FOSL1P15407 271 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 CDK8P49336 464 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 ERVK-24P63145 666 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 RING1Q06587 406 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 PPM1JQ5JR12 505 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 LEMD3Q9Y2U8 911 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 U3KQE9 123 aa7.4□□□□□ -1.22
RAB3IP-214ENST00000550847 RNGTTO60942 597 aaKnown RBP7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 INPP5AQ14642 412 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 TTBK2Q6IQ55 1244 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 NFXL1Q6ZNB6 911 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 C12orf40Q86WS4 652 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 RNF214Q8ND24 703 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 PSMG3-AS1Q96PY0 264 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 SAMM50Q9Y512 469 aa7.39□□□□□ -1.23
RAB3IP-214ENST00000550847 LEFTY1O75610 366 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 GRIK1P39086 918 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 PSMD2Q13200 908 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 CCDC85BQ15834 202 aaPredicted RBP7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 INTS5Q6P9B9 1019 aaKnown RBP7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 PCDHA4Q9UN74 947 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 CYP8B1Q9UNU6 501 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
RAB3IP-214ENST00000550847 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 LRRC14Q15048 493 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 MAP3K11Q16584 847 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 OGFOD3Q6PK18 319 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 GIMAP7Q8NHV1 300 aa7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 METTL22Q9BUU2 404 aaPredicted RBP7.37□□□□□ -1.23
RAB3IP-214ENST00000550847 CYP26A1O43174 497 aa7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 FGD1P98174 961 aa7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 SEPT6Q14141 434 aa7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 ZC3H7BQ9UGR2 993 aaKnown RBP7.36□□□□□ -1.23
RAB3IP-214ENST00000550847 RBAK-RBAKDNI3L0D1 243 aa7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 LIG3P49916 1009 aa7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 DUSP23Q9BVJ7 150 aa7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 PCOLCE2Q9UKZ9 415 aa7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
RAB3IP-214ENST00000550847 F6X3S4 739 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 HNRNPUQ00839 825 aaKnown RBP eCLIP7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 AGMOQ6ZNB7 445 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 CYFIP1Q7L576 1253 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 FBRSQ9HAH7 460 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
RAB3IP-214ENST00000550847 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 GP2P55259 537 aaKnown RBP7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 RPS26P62854 115 aaKnown RBP7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 CYP27A1Q02318 531 aa7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 TAF1CQ15572 869 aaPredicted RBP7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 CCDC39Q9UFE4 941 aa7.33□□□□□ -1.24
RAB3IP-214ENST00000550847 USP31Q70CQ4 1352 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms