RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ARSHQ5FYA8 562 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 NUCKS1Q9H1E3 243 aaKnown RBP8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 SLKQ9H2G2 1235 aaPredicted RBP8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 TMX1Q9H3N1 280 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 KLHL42Q9P2K6 505 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 C3P01024 1663 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 J3QW42 95 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 LMNB1P20700 586 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 NME2P22392 152 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 GYS2P54840 703 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 GPLD1P80108 840 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 GK5Q6ZS86 529 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 ILDR2Q71H61 639 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 NOL8Q76FK4 1167 aaKnown RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 CLEC4MQ9H2X3 399 aaPredicted RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 SAMM50Q9Y512 469 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 ATP10AO60312 1499 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 KDM5CP41229 1560 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 ABCA6Q8N139 1617 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 CDC42BPBQ9Y5S2 1711 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 IMPDH2P12268 514 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 FXNQ16595 210 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 FAM9AQ8IZU1 332 aaPredicted RBP8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 JMYQ8N9B5 988 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 STK35Q8TDR2 534 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 EHMT1Q9H9B1 1298 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
TGFBR1-208ENST00000550253 TRIM37O94972 964 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 B3GALT4O96024 378 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 CD33P20138 364 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 AMPD3Q01432 767 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 DBN1Q16643 649 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 GAL3ST3Q96A11 431 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 LEMD3Q9Y2U8 911 aa8.53□□□□□ -1.04
TGFBR1-208ENST00000550253 MLLT1Q03111 559 aaPredicted RBP8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 ZNF423Q2M1K9 1284 aa8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 C2orf27AQ580R0 203 aa8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 HFE2Q6ZVN8 426 aa8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 GRIN3AQ8TCU5 1115 aa8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
TGFBR1-208ENST00000550253 SLC35F4A4IF30 521 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 GJB6O95452 261 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 PCDH1Q08174 1060 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 LRRC14Q15048 493 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 ADAMTSL4Q6UY14 1074 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 C16orf86Q6ZW13 317 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 EEA1Q15075 1411 aa8.51□□□□□ -1.05
TGFBR1-208ENST00000550253 H7C1W4 665 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 ATE1O95260 518 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 BPNT1O95861 308 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 ARNTP27540 789 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 VN1R5Q7Z5H4 357 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 THAP3Q8WTV1 239 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 PCDHB14Q9Y5E9 798 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 REREQ9P2R6 1566 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 ITSN2Q9NZM3 1697 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
TGFBR1-208ENST00000550253 MASP1P48740 699 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 RPL6Q02878 288 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 PTPN11Q06124 597 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 ZNF252P-AS1Q0IIN9 211 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 TKFCQ3LXA3 575 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 MTERF2Q49AM1 385 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 C19orf47Q8N9M1 422 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 FEZ1Q99689 392 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 ARHGAP5Q13017 1502 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 ZNF518AQ6AHZ1 1483 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 PREX2Q70Z35 1606 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 PARNO95453 639 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 GHRHP01286 108 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 PTSQ03393 145 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 PLEKHG6Q3KR16 790 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 CEP135Q66GS9 1140 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 SCARA3Q6AZY7 606 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 RUFY4Q6ZNE9 571 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 ATXN7L1Q9ULK2 861 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
TGFBR1-208ENST00000550253 SPATA31D1Q6ZQQ2 1576 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 KDM2BQ8NHM5 1336 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 ABCC1P33527 1531 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms