RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
CALCOCO1-214ENST00000549613 DAGLAQ9Y4D2 1042 aa16.16■□□□□ 0.18
CALCOCO1-214ENST00000549613 LAMA4Q16363 1823 aa16.16■□□□□ 0.18
CALCOCO1-214ENST00000549613 F8W031 263 aaPredicted RBP16.15■□□□□ 0.18
CALCOCO1-214ENST00000549613 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
CALCOCO1-214ENST00000549613 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
CALCOCO1-214ENST00000549613 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
CALCOCO1-214ENST00000549613 FGRP09769 529 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 HSPA6P17066 643 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 DDIT3P35638 169 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 CRKP46108 304 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 NUCB2P80303 420 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 ESR2Q92731 530 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 BRF1Q92994 677 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 MXD3Q9BW11 206 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 TOMM22Q9NS69 142 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 LTBP3Q9NS15 1303 aa16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
CALCOCO1-214ENST00000549613 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 B4E1Z4 1266 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 RHBDL3P58872 404 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 PDE4BQ07343 736 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 ME3Q16798 604 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 RSBN1LQ6PCB5 846 aaPredicted RBP16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 KIAA0825Q8IV33 1275 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 USP40Q9NVE5 1235 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 HDAC9Q9UKV0 1011 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 TIAM2Q8IVF5 1701 aa16.13■□□□□ 0.17
CALCOCO1-214ENST00000549613 CAPN15O75808 1086 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 MMP14P50281 582 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 SCNN1DP51172 638 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 EVCP57679 992 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 NEDD4P46934 1319 aa16.12■□□□□ 0.17
CALCOCO1-214ENST00000549613 ERICH2A1L162 156 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 ORC4O43929 436 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 PFKFB2O60825 505 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 KDM4AO75164 1064 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 ANTXR2P58335 489 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 TNIP1Q15025 636 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 FER1L6Q2WGJ9 1857 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
CALCOCO1-214ENST00000549613 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 NFKBIEO00221 500 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 RAD17O75943 681 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 USP17L8P0C7I0 530 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 CIAPIN1Q6FI81 312 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 APOBEC3HQ6NTF7 200 aaKnown RBP16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 CDC42EP5Q6NZY7 148 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 OGFOD1Q8N543 542 aa16.1■□□□□ 0.17
CALCOCO1-214ENST00000549613 CYP2D7A0A087X1C5 515 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 PSMD14O00487 310 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 IFIT3O14879 490 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 DHX16O60231 1041 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 NPM3O75607 178 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 LARGE1O95461 756 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 LIFRP42702 1097 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 TMEM67Q5HYA8 995 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 PSME4Q14997 1843 aa16.09■□□□□ 0.17
CALCOCO1-214ENST00000549613 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
CALCOCO1-214ENST00000549613 CYP2D6P10635 497 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms